RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 SLC4A3P48751 1232 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 CCNA1P78396 465 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 HMGN5P82970 282 aaKnown RBP19.44■□□□□ 0.7
TRIM39-211ENST00000458516 TYW1BQ6NUM6 668 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 HEATR3Q7Z4Q2 680 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 ZNF713Q8N859 430 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-211ENST00000458516 SHISA4Q96DD7 197 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 INTS4Q96HW7 963 aaKnown RBP19.44■□□□□ 0.7
TRIM39-211ENST00000458516 EFCC1Q9HA90 598 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 HOMER2Q9NSB8 354 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 RNF146Q9NTX7 359 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 BARHL2Q9NY43 387 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 TSKSQ9UJT2 592 aa19.44■□□□□ 0.7
TRIM39-211ENST00000458516 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-211ENST00000458516 PLXNA1Q9UIW2 1896 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 GPR25O00155 361 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 ANP32AP39687 249 aaKnown RBP19.43■□□□□ 0.7
TRIM39-211ENST00000458516 TRAF1Q13077 416 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 BECN1Q14457 450 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 NOM1Q5C9Z4 860 aaKnown RBP19.43■□□□□ 0.7
TRIM39-211ENST00000458516 MUM1L1Q5H9M0 696 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 NCAPG2Q86XI2 1143 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 CLEC4DQ8WXI8 215 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 TRERF1Q96PN7 1200 aa19.43■□□□□ 0.7
TRIM39-211ENST00000458516 OPLAHO14841 1288 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 GJB2P29033 226 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 PPP1R18Q6NYC8 613 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.42■□□□□ 0.7
TRIM39-211ENST00000458516 CHST13Q8NET6 341 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 WASF1Q92558 559 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 ALG1Q9BT22 464 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 MROH8Q9H579 483 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 ACAD9Q9H845 621 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 VPS54Q9P1Q0 977 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 SMC3Q9UQE7 1217 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 MRPL11Q9Y3B7 192 aaKnown RBP19.42■□□□□ 0.7
TRIM39-211ENST00000458516 PCNTO95613 3336 aa19.42■□□□□ 0.7
TRIM39-211ENST00000458516 NFIBO00712 420 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 CTGFP29279 349 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 MAPK4P31152 587 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 NAPAP54920 295 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 LACTBP83111 547 aaPredicted RBP19.41■□□□□ 0.7
TRIM39-211ENST00000458516 SP3Q02447 781 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 FBXO40Q9UH90 709 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 CASP8AP2Q9UKL3 1982 aa19.41■□□□□ 0.7
TRIM39-211ENST00000458516 CAP1Q01518 475 aa19.4■□□□□ 0.7
TRIM39-211ENST00000458516 GPR142Q7Z601 462 aa19.4■□□□□ 0.7
TRIM39-211ENST00000458516 ARHGAP39Q9C0H5 1083 aa19.4■□□□□ 0.7
TRIM39-211ENST00000458516 SH3GLB2Q9NR46 395 aa19.4■□□□□ 0.7
TRIM39-211ENST00000458516 ESYT2A0FGR8 921 aa19.39■□□□□ 0.69
TRIM39-211ENST00000458516 GHRHRQ02643 423 aa19.39■□□□□ 0.69
TRIM39-211ENST00000458516 WDR78Q5VTH9 848 aa19.39■□□□□ 0.69
TRIM39-211ENST00000458516 FAM184AQ8NB25 1140 aa19.39■□□□□ 0.69
TRIM39-211ENST00000458516 CCDC148Q8NFR7 591 aa19.39■□□□□ 0.69
TRIM39-211ENST00000458516 ZNF296Q8WUU4 475 aaPredicted RBP19.39■□□□□ 0.69
TRIM39-211ENST00000458516 A1CFQ9NQ94 594 aaKnown RBP19.39■□□□□ 0.69
TRIM39-211ENST00000458516 GJB4Q9NTQ9 266 aa19.39■□□□□ 0.69
TRIM39-211ENST00000458516 FKTNO75072 461 aa19.38■□□□□ 0.69
TRIM39-211ENST00000458516 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-211ENST00000458516 HSPA1AP0DMV8 641 aaKnown RBP19.38■□□□□ 0.69
TRIM39-211ENST00000458516 HSPA1BP0DMV9 641 aaKnown RBP19.38■□□□□ 0.69
TRIM39-211ENST00000458516 FOSBP53539 338 aa19.38■□□□□ 0.69
TRIM39-211ENST00000458516 PLEKHH3Q7Z736 793 aa19.38■□□□□ 0.69
TRIM39-211ENST00000458516 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
TRIM39-211ENST00000458516 FAM177A1Q8N128 213 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-211ENST00000458516 CD99L2Q8TCZ2 262 aa19.38■□□□□ 0.69
TRIM39-211ENST00000458516 CCDC12Q8WUD4 166 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-211ENST00000458516 TBC1D5Q92609 795 aa19.38■□□□□ 0.69
TRIM39-211ENST00000458516 ZMYND12Q9H0C1 365 aa19.38■□□□□ 0.69
TRIM39-211ENST00000458516 FOXN1O15353 648 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
TRIM39-211ENST00000458516 HSPA8P11142 646 aaKnown RBP19.37■□□□□ 0.69
TRIM39-211ENST00000458516 PSMC4P43686 418 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 ADCY7P51828 1080 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 FCGRTP55899 365 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 NPY5RQ15761 445 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 NSMFQ6X4W1 530 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 SLC30A10Q6XR72 485 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 MCF2L2Q86YR7 1114 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 SPRYD3Q8NCJ5 442 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 RGS22Q8NE09 1264 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 TRIM47Q96LD4 638 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 MMP19Q99542 508 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 PHF20Q9BVI0 1012 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 CYP39A1Q9NYL5 469 aa19.37■□□□□ 0.69
TRIM39-211ENST00000458516 PFASO15067 1338 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 MCM3APO60318 1980 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 SMCO2A6NFE2 343 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 ADAMTS3O15072 1205 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 FCER1AP12319 257 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 XBP1P17861 261 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 PTPREP23469 700 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 HSD17B4P51659 736 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 GRB14Q14449 540 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 ABRAQ8N0Z2 381 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 ERO1AQ96HE7 468 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 C8orf76Q96K31 380 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 MAF1Q9H063 256 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 PSTPIP2Q9H939 334 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms