RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 BAATQ14032 418 aaPredicted RBP21.77■■□□□ 1.08
USP39-209ENST00000458268 QRICH1Q2TAL8 776 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 SLC30A10Q6XR72 485 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 ARMCX2Q7L311 632 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 CCDC144CPQ8IYA2 1237 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 TCEANC2Q96MN5 208 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.77■■□□□ 1.08
USP39-209ENST00000458268 CYP39A1Q9NYL5 469 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 MAD2L2Q9UI95 211 aa21.77■■□□□ 1.08
USP39-209ENST00000458268 ALPK3Q96L96 1907 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 SOWAHBA6NEL2 793 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 GRM4Q14833 912 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 EEPD1Q7L9B9 569 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 UBE2Q1Q7Z7E8 422 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 IGDCC4Q8TDY8 1250 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 FGD4Q96M96 766 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 JMJD4Q9H9V9 463 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
USP39-209ENST00000458268 SH2B2O14492 632 aaPredicted RBP21.75■■□□□ 1.07
USP39-209ENST00000458268 SNAI1O95863 264 aaPredicted RBP21.75■■□□□ 1.07
USP39-209ENST00000458268 IGHA2P01877 340 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 RARBP10826 455 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 RXRAP19793 462 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 PRPF38BQ5VTL8 546 aaKnown RBP21.75■■□□□ 1.07
USP39-209ENST00000458268 RNF207Q6ZRF8 634 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.75■■□□□ 1.07
USP39-209ENST00000458268 FBXO11Q86XK2 927 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 ZNF654Q8IZM8 581 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 FAM133AQ8N9E0 248 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 NEK1Q96PY6 1258 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 WDR19Q8NEZ3 1342 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 SYNGAP1Q96PV0 1343 aa21.75■■□□□ 1.07
USP39-209ENST00000458268 KBTBD13C9JR72 458 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 EVI5O60447 810 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 AKR1A1P14550 325 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 CAPN2P17655 700 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 NOL8Q76FK4 1167 aaKnown RBP21.74■■□□□ 1.07
USP39-209ENST00000458268 RASEFQ8IZ41 740 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 CTCFLQ8NI51 663 aaPredicted RBP21.74■■□□□ 1.07
USP39-209ENST00000458268 TMEM87BQ96K49 555 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 SENP6Q9GZR1 1112 aaPredicted RBP21.74■■□□□ 1.07
USP39-209ENST00000458268 XPNPEP3Q9NQH7 507 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 PNMA2Q9UL42 364 aa21.74■■□□□ 1.07
USP39-209ENST00000458268 NAP1L2Q9ULW6 460 aaPredicted RBP21.74■■□□□ 1.07
USP39-209ENST00000458268 PGK1P00558 417 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 ZNF865P0CJ78 1059 aaPredicted RBP21.73■■□□□ 1.07
USP39-209ENST00000458268 MNX1P50219 401 aaPredicted RBP21.73■■□□□ 1.07
USP39-209ENST00000458268 ATN1P54259 1190 aaPredicted RBP21.73■■□□□ 1.07
USP39-209ENST00000458268 FGD1P98174 961 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 ACVR2BQ13705 512 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 ADCK5Q3MIX3 580 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 ZNF467Q7Z7K2 595 aaPredicted RBP21.73■■□□□ 1.07
USP39-209ENST00000458268 C7orf61Q8IZ16 206 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 MSL3Q8N5Y2 521 aaKnown RBP21.73■■□□□ 1.07
USP39-209ENST00000458268 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 PIGSQ96S52 555 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 FAM184BQ9ULE4 1060 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 ABCB11O95342 1321 aa21.73■■□□□ 1.07
USP39-209ENST00000458268 LRRC37A2A6NM11 1700 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 PALM3A6NDB9 673 aaPredicted RBP21.72■■□□□ 1.07
USP39-209ENST00000458268 ASB14A6NK59 587 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 REC8O95072 547 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 MAMDC4Q6UXC1 1216 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 ARRDC4Q8NCT1 418 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 FERMT2Q96AC1 680 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 NRBP1Q9UHY1 535 aa21.72■■□□□ 1.07
USP39-209ENST00000458268 MKI67P46013 3256 aaKnown RBP21.72■■□□□ 1.07
USP39-209ENST00000458268 CPA1P15085 419 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
USP39-209ENST00000458268 TROAPQ12815 778 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 MICU3Q86XE3 530 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 FBXO16Q8IX29 292 aaPredicted RBP21.71■■□□□ 1.07
USP39-209ENST00000458268 JAKMIP1Q96N16 626 aaKnown RBP21.71■■□□□ 1.07
USP39-209ENST00000458268 AMNQ9BXJ7 453 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 ABHD16BQ9H3Z7 469 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 ADD3Q9UEY8 706 aaKnown RBP21.71■■□□□ 1.07
USP39-209ENST00000458268 SLC12A7Q9Y666 1083 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 ASTN1O14525 1302 aa21.71■■□□□ 1.07
USP39-209ENST00000458268 H0YGN5 161 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 DDAH1O94760 285 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 KIF5BP33176 963 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 ALDH5A1P51649 535 aaPredicted RBP21.7■■□□□ 1.06
USP39-209ENST00000458268 KRT32Q14532 448 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 CCDC144BQ3MJ40 725 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 TBC1D5Q92609 795 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 MRPL11Q9Y3B7 192 aaKnown RBP21.7■■□□□ 1.06
USP39-209ENST00000458268 NR2E3Q9Y5X4 410 aa21.7■■□□□ 1.06
USP39-209ENST00000458268 DNM1LO00429 736 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 ZBTB5O15062 677 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 CFBP00751 764 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 LRRC41Q15345 812 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 SLC35G1Q2M3R5 365 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 SYNE3Q6ZMZ3 975 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 CMTR1Q8N1G2 835 aaKnown RBP21.69■■□□□ 1.06
USP39-209ENST00000458268 TMTC2Q8N394 836 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
USP39-209ENST00000458268 PLEKHA8P1O95397 391 aa21.68■■□□□ 1.06
USP39-209ENST00000458268 ADCYAP1R1P41586 468 aa21.68■■□□□ 1.06
USP39-209ENST00000458268 PDE4DQ08499 809 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms