RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CERS5Q8N5B7 392 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 GIMAP7Q8NHV1 300 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 HINFPQ9BQA5 517 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 MYH13Q9UKX3 1938 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 CTAGE9A4FU28 777 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 ZMYND10O75800 440 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 USP8P40818 1118 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 CDK8P49336 464 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 PPP2R5AQ15172 486 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 SPECC1LQ69YQ0 1117 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 NCAPH2Q6IBW4 605 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 RCSD1Q6JBY9 416 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 SAMSN1Q9NSI8 373 aaKnown RBP15.2■□□□□ 0.02
TOP3B-213ENST00000457179 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
TOP3B-213ENST00000457179 WNK3Q9BYP7 1800 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 INPP5BP32019 993 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 NFIAQ12857 509 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 RILPL1Q5EBL4 403 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 GSPT2Q8IYD1 628 aaKnown RBP15.19■□□□□ 0.02
TOP3B-213ENST00000457179 FAM107BQ9H098 131 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 DAGLAQ9Y4D2 1042 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 CAPN7Q9Y6W3 813 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 C21orf2O43822 256 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-213ENST00000457179 SYF2O95926 243 aaKnown RBP15.19■□□□□ 0.02
TOP3B-213ENST00000457179 PTPREP23469 700 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 KRT2P35908 639 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-213ENST00000457179 CEP95Q96GE4 821 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 GPCPD1Q9NPB8 672 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.19■□□□□ 0.02
TOP3B-213ENST00000457179 FLT1P17948 1338 aa15.19■□□□□ 0.02
TOP3B-213ENST00000457179 A0A087X0B3 334 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 ZNF772Q68DY9 489 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 TMTC3Q6ZXV5 915 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 TMEM47Q9BQJ4 181 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 CICQ96RK0 1608 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 TRIM75PA6NK02 468 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 H0YIN7 160 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 BCAS4Q8TDM0 211 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 RNF26Q9BY78 433 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 ATP6V0A2Q9Y487 856 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 MYO1FO00160 1098 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 AOC3Q16853 763 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 RAD9BQ6WBX8 426 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 RPAINQ86UA6 219 aa15.18■□□□□ 0.02
TOP3B-213ENST00000457179 FOXP1Q9H334 677 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-213ENST00000457179 KLRF2D3W0D1 207 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 ABL1P00519 1130 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 ZFPM1Q8IX07 1006 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 BLZF1Q9H2G9 400 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 DDX4Q9NQI0 724 aaKnown RBP15.17■□□□□ 0.02
TOP3B-213ENST00000457179 SCG2P13521 617 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 RASA1P20936 1047 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 KIF5BP33176 963 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 SLC16A2P36021 539 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 GGCXP38435 758 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 C4AP0C0L4 1744 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
TOP3B-213ENST00000457179 PTGDRQ13258 359 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 TYW1BQ6NUM6 668 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 SYMPKQ92797 1274 aaKnown RBP15.16■□□□□ 0.02
TOP3B-213ENST00000457179 CD248Q9HCU0 757 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 ADGRG1Q9Y653 693 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 NPR1P16066 1061 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 PDE6BP35913 854 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 ACRBPQ8NEB7 543 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 FAM76AQ8TAV0 307 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 CRACR2AQ9BSW2 395 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 HOOK1Q9UJC3 728 aaKnown RBP15.16■□□□□ 0.02
TOP3B-213ENST00000457179 MAPK8IP1Q9UQF2 711 aa15.16■□□□□ 0.02
TOP3B-213ENST00000457179 ALDH1B1P30837 517 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 TBX2Q13207 712 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-213ENST00000457179 POTEAQ6S8J7 498 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 SP8Q8IXZ3 490 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 CENPHQ9H3R5 247 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 SHTN1A0MZ66 631 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
TOP3B-213ENST00000457179 MDM2Q00987 491 aaPredicted RBP15.15■□□□□ 0.02
TOP3B-213ENST00000457179 SATB1Q01826 763 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 STIM1Q13586 685 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 INF2Q27J81 1249 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 CRAMP1Q96RY5 1269 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 LRP5O75197 1615 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 GOLGA6CA6NDK9 693 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 USP17L5A8MUK1 530 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 ORC4O43929 436 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 RAD17O75943 681 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 GOLGA6DP0CG33 693 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 RHBDL3P58872 404 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 RBM28Q9NW13 759 aaKnown RBP15.15■□□□□ 0.02
TOP3B-213ENST00000457179 GOLGA6AQ9NYA3 693 aa15.15■□□□□ 0.02
TOP3B-213ENST00000457179 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms