RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FANCBQ8NB91 859 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 BRF1Q92994 677 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 MTMR8Q96EF0 704 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 KIF2CQ99661 725 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
ATG4A-206ENST00000457035 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
ATG4A-206ENST00000457035 MROH8Q9H579 483 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 JMJD4Q9H9V9 463 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 CTDP1Q9Y5B0 961 aaPredicted RBP11.71□□□□□ -0.53
ATG4A-206ENST00000457035 PLXNA1Q9UIW2 1896 aa11.71□□□□□ -0.53
ATG4A-206ENST00000457035 SLC15A5A6NIM6 579 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 ICAM1P05362 532 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
ATG4A-206ENST00000457035 APOBRQ0VD83 1088 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 IRF5Q13568 498 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 GRB14Q14449 540 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 CCDC174Q6PII3 467 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
ATG4A-206ENST00000457035 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 CTCFLQ8NI51 663 aaPredicted RBP11.7□□□□□ -0.54
ATG4A-206ENST00000457035 NUDT12Q9BQG2 462 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
ATG4A-206ENST00000457035 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 MCM3APO60318 1980 aa11.7□□□□□ -0.54
ATG4A-206ENST00000457035 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 ZBTB43O43298 467 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 KIF5BP33176 963 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 COPB2P35606 906 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 RCAN1P53805 252 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 FGD1P98174 961 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 MAP2K5Q13163 448 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 TKFCQ3LXA3 575 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 WDR78Q5VTH9 848 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 SRBD1Q8N5C6 995 aaKnown RBP11.69□□□□□ -0.54
ATG4A-206ENST00000457035 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
ATG4A-206ENST00000457035 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 COBLO75128 1261 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 HOXC6P09630 235 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 FCER1AP12319 257 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 ALAS1P13196 640 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 TAL1P17542 331 aaPredicted RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 CYP2B6P20813 491 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 PDIA3P30101 505 aaKnown RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 CDC27P30260 824 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 GNAQP50148 359 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 FUT2Q10981 343 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 PPP2R5BQ15173 497 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 QRICH1Q2TAL8 776 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 RAET1EQ8TD07 263 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
ATG4A-206ENST00000457035 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 CCPG1Q9ULG6 757 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 IVNS1ABPQ9Y6Y0 642 aa11.68□□□□□ -0.54
ATG4A-206ENST00000457035 ZBTB5O15062 677 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 ADCY3O60266 1144 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 PPP1R11O60927 126 aaPredicted RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 IGHA2P01877 340 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 ADORA2AP29274 412 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 RGS2P41220 211 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 NEK4P51957 841 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 RTN1Q16799 776 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 TMTC3Q6ZXV5 915 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 PDCD7Q8N8D1 485 aaKnown RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 NPLOC4Q8TAT6 608 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 SOCS4Q8WXH5 440 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 CLEC4DQ8WXI8 215 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 PIGSQ96S52 555 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 MMP19Q99542 508 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 CWC22Q9HCG8 908 aaKnown RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 HOMER2Q9NSB8 354 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 RNF146Q9NTX7 359 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 RBM28Q9NW13 759 aaKnown RBP11.67□□□□□ -0.54
ATG4A-206ENST00000457035 FBXO40Q9UH90 709 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 PNMA2Q9UL42 364 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 BRCA2P51587 3418 aa11.67□□□□□ -0.54
ATG4A-206ENST00000457035 LCTP09848 1927 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms