RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 SYNRGQ9UMZ2 1314 aa20.92■□□□□ 0.94
MSH6-207ENST00000456246 MOXD2PA6NHM9 499 aa20.91■□□□□ 0.94
MSH6-207ENST00000456246 ADCYAP1R1P41586 468 aa20.91■□□□□ 0.94
MSH6-207ENST00000456246 CCDC144BQ3MJ40 725 aa20.91■□□□□ 0.94
MSH6-207ENST00000456246 CENPQQ7L2Z9 268 aaPredicted RBP20.91■□□□□ 0.94
MSH6-207ENST00000456246 MAF1Q9H063 256 aa20.91■□□□□ 0.94
MSH6-207ENST00000456246 SOWAHBA6NEL2 793 aa20.9■□□□□ 0.94
MSH6-207ENST00000456246 CST5P28325 142 aaPredicted RBP20.9■□□□□ 0.94
MSH6-207ENST00000456246 MAGEA10P43363 369 aaPredicted RBP20.9■□□□□ 0.94
MSH6-207ENST00000456246 IFIT1BQ5T764 474 aaKnown RBP20.9■□□□□ 0.94
MSH6-207ENST00000456246 NUP133Q8WUM0 1156 aa20.9■□□□□ 0.94
MSH6-207ENST00000456246 KATNBL1Q9H079 304 aa20.9■□□□□ 0.94
MSH6-207ENST00000456246 CYP21A2P08686 494 aa20.89■□□□□ 0.93
MSH6-207ENST00000456246 PCSK9Q8NBP7 692 aaKnown RBP20.89■□□□□ 0.93
MSH6-207ENST00000456246 KLHDC9Q8NEP7 349 aa20.89■□□□□ 0.93
MSH6-207ENST00000456246 MPHOSPH6Q99547 160 aaKnown RBP20.89■□□□□ 0.93
MSH6-207ENST00000456246 UPF3AQ9H1J1 476 aaKnown RBP20.89■□□□□ 0.93
MSH6-207ENST00000456246 ATP11BQ9Y2G3 1177 aa20.89■□□□□ 0.93
MSH6-207ENST00000456246 DNAH12Q6ZR08 3092 aa20.88■□□□□ 0.93
MSH6-207ENST00000456246 NFIBO00712 420 aa20.88■□□□□ 0.93
MSH6-207ENST00000456246 PARP1P09874 1014 aaKnown RBP20.88■□□□□ 0.93
MSH6-207ENST00000456246 GOLGA8HP0CJ92 632 aa20.88■□□□□ 0.93
MSH6-207ENST00000456246 PTH1RQ03431 593 aa20.88■□□□□ 0.93
MSH6-207ENST00000456246 RALYLQ86SE5 291 aaKnown RBP20.88■□□□□ 0.93
MSH6-207ENST00000456246 MORC4Q8TE76 937 aa20.88■□□□□ 0.93
MSH6-207ENST00000456246 FERMT2Q96AC1 680 aa20.88■□□□□ 0.93
MSH6-207ENST00000456246 LENG1Q96BZ8 264 aaPredicted RBP20.88■□□□□ 0.93
MSH6-207ENST00000456246 LBHD1Q9BQE6 289 aaPredicted RBP20.88■□□□□ 0.93
MSH6-207ENST00000456246 A0A1W2PQ45 241 aaPredicted RBP20.87■□□□□ 0.93
MSH6-207ENST00000456246 A0A1W2PQY0 241 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 ERICH2A1L162 156 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 PTPDC1A2A3K4 754 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 ACLYP53396 1101 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 GJA9P57773 515 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 NKX3-2P78367 333 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 BAATQ14032 418 aaPredicted RBP20.87■□□□□ 0.93
MSH6-207ENST00000456246 SART3Q15020 963 aaKnown RBP20.87■□□□□ 0.93
MSH6-207ENST00000456246 SEC23AQ15436 765 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 TRIM60Q495X7 471 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 RNF207Q6ZRF8 634 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 KIAA1211Q6ZU35 1233 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 RGS22Q8NE09 1264 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 NCOA7Q8NI08 942 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 CLEC4DQ8WXI8 215 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 MAP4K1Q92918 833 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 UBE2OQ9C0C9 1292 aaKnown RBP20.87■□□□□ 0.93
MSH6-207ENST00000456246 VTA1Q9NP79 307 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 PCDH10Q9P2E7 1040 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 LRRC37A2A6NM11 1700 aa20.87■□□□□ 0.93
MSH6-207ENST00000456246 ASTN1O14525 1302 aa20.86■□□□□ 0.93
MSH6-207ENST00000456246 C6orf222P0C671 652 aaPredicted RBP20.86■□□□□ 0.93
MSH6-207ENST00000456246 ALDH5A1P51649 535 aaPredicted RBP20.86■□□□□ 0.93
MSH6-207ENST00000456246 TNFAIP2Q03169 654 aa20.86■□□□□ 0.93
MSH6-207ENST00000456246 CDC37Q16543 378 aaPredicted RBP20.86■□□□□ 0.93
MSH6-207ENST00000456246 TDHQ8IZJ6 230 aa20.86■□□□□ 0.93
MSH6-207ENST00000456246 UBA5Q9GZZ9 404 aa20.86■□□□□ 0.93
MSH6-207ENST00000456246 STARD7Q9NQZ5 370 aa20.86■□□□□ 0.93
MSH6-207ENST00000456246 ELP1O95163 1332 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 ABCB11O95342 1321 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 LCTP09848 1927 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 B4DLN1 442 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 MRPL12P52815 198 aaKnown RBP20.85■□□□□ 0.93
MSH6-207ENST00000456246 KCNA10Q16322 511 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 IQSEC1Q6DN90 963 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 CCSAPQ6IQ19 270 aaPredicted RBP20.85■□□□□ 0.93
MSH6-207ENST00000456246 CYB5R4Q7L1T6 521 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 ADGRF4Q8IZF3 695 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 DNERQ8NFT8 737 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 GLT1D1Q96MS3 346 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 Q9Y3F1 56 aa20.85■□□□□ 0.93
MSH6-207ENST00000456246 E7EWF7 191 aa20.84■□□□□ 0.93
MSH6-207ENST00000456246 ADCY6O43306 1168 aa20.84■□□□□ 0.93
MSH6-207ENST00000456246 DHX16O60231 1041 aaKnown RBP20.84■□□□□ 0.93
MSH6-207ENST00000456246 RPS6P62753 249 aaKnown RBP20.84■□□□□ 0.93
MSH6-207ENST00000456246 USH1GQ495M9 461 aa20.84■□□□□ 0.93
MSH6-207ENST00000456246 BMP2KLQ5H9B9 411 aa20.84■□□□□ 0.93
MSH6-207ENST00000456246 SLC30A10Q6XR72 485 aa20.84■□□□□ 0.93
MSH6-207ENST00000456246 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
MSH6-207ENST00000456246 MROH7Q68CQ1 1323 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 IFIT3O14879 490 aaKnown RBP20.83■□□□□ 0.93
MSH6-207ENST00000456246 CALML3P27482 149 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 MDM2Q00987 491 aaPredicted RBP20.83■□□□□ 0.93
MSH6-207ENST00000456246 TLE2Q04725 743 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 GNASQ5JWF2 1037 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 TLK2Q86UE8 772 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 MCF2L2Q86YR7 1114 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 TOX2Q96NM4 488 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 AP5M1Q9H0R1 490 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 PDLIM7Q9NR12 457 aa20.83■□□□□ 0.93
MSH6-207ENST00000456246 GNEQ9Y223 722 aaKnown RBP20.83■□□□□ 0.93
MSH6-207ENST00000456246 RBM8AQ9Y5S9 174 aaKnown RBP20.83■□□□□ 0.93
MSH6-207ENST00000456246 ZEB2O60315 1214 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 CABYRO75952 493 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 ASGR1P07306 291 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 TRAF1Q13077 416 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 WTAPQ15007 396 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 LRIT3Q3SXY7 679 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 ANKRD33Q7Z3H0 272 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 FBXO11Q86XK2 927 aa20.82■□□□□ 0.92
MSH6-207ENST00000456246 FBXO16Q8IX29 292 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms