RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 ZBTB43O43298 467 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
LINC01563-201ENST00000456235 PSMA5P28066 241 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 CACNB2Q08289 660 aaPredicted RBP16.35■□□□□ 0.21
LINC01563-201ENST00000456235 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
LINC01563-201ENST00000456235 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
LINC01563-201ENST00000456235 TRPV1Q8NER1 839 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 MAML3Q96JK9 1138 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 FGD4Q96M96 766 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 RNF208Q9H0X6 261 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
LINC01563-201ENST00000456235 CALML3P27482 149 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 CDC27P30260 824 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 COPB2P35606 906 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 STK3Q13188 491 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 RTN1Q16799 776 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 ZNF792Q3KQV3 632 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 ANO1Q5XXA6 986 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 CHST13Q8NET6 341 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 ASTN1O14525 1302 aa16.34■□□□□ 0.21
LINC01563-201ENST00000456235 STRNO43815 780 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 FDX1P10109 184 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 EN2P19622 333 aaPredicted RBP16.33■□□□□ 0.2
LINC01563-201ENST00000456235 UBXN2AP68543 259 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
LINC01563-201ENST00000456235 BAATQ14032 418 aaPredicted RBP16.33■□□□□ 0.2
LINC01563-201ENST00000456235 SYNE3Q6ZMZ3 975 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 FBXO11Q86XK2 927 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 LENG1Q96BZ8 264 aaPredicted RBP16.33■□□□□ 0.2
LINC01563-201ENST00000456235 NCOA5Q9HCD5 579 aaKnown RBP16.33■□□□□ 0.2
LINC01563-201ENST00000456235 FBXO40Q9UH90 709 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 CNTNAP5Q8WYK1 1306 aa16.33■□□□□ 0.2
LINC01563-201ENST00000456235 SOWAHBA6NEL2 793 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 ZBTB5O15062 677 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
LINC01563-201ENST00000456235 HOXC6P09630 235 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 XRCC5P13010 732 aaKnown RBP16.32■□□□□ 0.2
LINC01563-201ENST00000456235 CNGA1P29973 690 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 KIF5BP33176 963 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 METAP2P50579 478 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC01563-201ENST00000456235 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 TMTC2Q8N394 836 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.2
LINC01563-201ENST00000456235 MTMR8Q96EF0 704 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 DEFB118Q96PH6 123 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC01563-201ENST00000456235 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 FAM217BQ9NTX9 383 aaPredicted RBP16.32■□□□□ 0.2
LINC01563-201ENST00000456235 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
LINC01563-201ENST00000456235 ABCB11O95342 1321 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 CALM1P0DP23 149 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 CALM2P0DP24 149 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 CALM3P0DP25 149 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 PTGS1P23219 599 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 ADD1P35611 737 aaKnown RBP16.31■□□□□ 0.2
LINC01563-201ENST00000456235 TKFCQ3LXA3 575 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 COL20A1Q9P218 1284 aa16.31■□□□□ 0.2
LINC01563-201ENST00000456235 OPLAHO14841 1288 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 HOXA13P31271 388 aaPredicted RBP16.3■□□□□ 0.2
LINC01563-201ENST00000456235 MAP3K21Q5TCX8 1036 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 MFSD14CQ5VZR4 134 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 EEPD1Q7L9B9 569 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 FAM133AQ8N9E0 248 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 RRP36Q96EU6 259 aaKnown RBP16.3■□□□□ 0.2
LINC01563-201ENST00000456235 TMEM106CQ9BVX2 250 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 ZHX1Q9UKY1 873 aaPredicted RBP16.3■□□□□ 0.2
LINC01563-201ENST00000456235 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
LINC01563-201ENST00000456235 PFASO15067 1338 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 LARGE1O95461 756 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 CFBP00751 764 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 CYBAP13498 195 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 AK2P54819 239 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
LINC01563-201ENST00000456235 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 PHKBQ93100 1093 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 MAP3K14Q99558 947 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 TINF2Q9BSI4 451 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 SPZ1Q9BXG8 430 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
LINC01563-201ENST00000456235 SLC5A4Q9NY91 659 aa16.29■□□□□ 0.2
LINC01563-201ENST00000456235 SEC63Q9UGP8 760 aaKnown RBP16.29■□□□□ 0.2
LINC01563-201ENST00000456235 RPTORQ8N122 1335 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms