RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 PRC1O43663 620 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 TROAPQ12815 778 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 FAM133AQ8N9E0 248 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 UBA5Q9GZZ9 404 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 LY9Q9HBG7 655 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 SENP2Q9HC62 589 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 MAD2L2Q9UI95 211 aa20.23■□□□□ 0.83
USP39-208ENST00000455732 PALM3A6NDB9 673 aaPredicted RBP20.22■□□□□ 0.83
USP39-208ENST00000455732 SH2B2O14492 632 aaPredicted RBP20.22■□□□□ 0.83
USP39-208ENST00000455732 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
USP39-208ENST00000455732 REC8O95072 547 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 KRT32Q14532 448 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 GRM4Q14833 912 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 MUM1L1Q5H9M0 696 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 ADGRF4Q8IZF3 695 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 KCNB2Q92953 911 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 CPVLQ9H3G5 476 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 LRRC37A2A6NM11 1700 aa20.22■□□□□ 0.83
USP39-208ENST00000455732 LIFRP42702 1097 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 CNTN2Q02246 1040 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 COL9A3Q14050 684 aaPredicted RBP20.21■□□□□ 0.83
USP39-208ENST00000455732 CDC37Q16543 378 aaPredicted RBP20.21■□□□□ 0.83
USP39-208ENST00000455732 GJC2Q5T442 439 aaPredicted RBP20.21■□□□□ 0.83
USP39-208ENST00000455732 CATIPQ7Z7H3 387 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 RASEFQ8IZ41 740 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 TMTC2Q8N394 836 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 STAG2Q8N3U4 1231 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 ARRDC4Q8NCT1 418 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 MAP3K14Q99558 947 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 CNPY2Q9Y2B0 182 aa20.21■□□□□ 0.83
USP39-208ENST00000455732 POTEB2H3BUK9 544 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 DDAH1O94760 285 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 AKR1A1P14550 325 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 LRRC26Q2I0M4 334 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 C7orf61Q8IZ16 206 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 CLEC4DQ8WXI8 215 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 NEK1Q96PY6 1258 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 PRO3102Q9H379 93 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.2■□□□□ 0.82
USP39-208ENST00000455732 CYP39A1Q9NYL5 469 aa20.2■□□□□ 0.82
USP39-208ENST00000455732 SOWAHBA6NEL2 793 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 RARBP10826 455 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 HSPA4P34932 840 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 LRRC41Q15345 812 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 CCDC144CPQ8IYA2 1237 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 MTMR8Q96EF0 704 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 SENP6Q9GZR1 1112 aaPredicted RBP20.19■□□□□ 0.82
USP39-208ENST00000455732 MAF1Q9H063 256 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
USP39-208ENST00000455732 ASTN1O14525 1302 aa20.19■□□□□ 0.82
USP39-208ENST00000455732 NFIBO00712 420 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 ACVR2BQ13705 512 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 SGMS1Q86VZ5 419 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 ZNF654Q8IZM8 581 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 KATNBL1Q9H079 304 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 ABHD16BQ9H3Z7 469 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 XPNPEP3Q9NQH7 507 aa20.18■□□□□ 0.82
USP39-208ENST00000455732 RBM27Q9P2N5 1060 aaKnown RBP20.18■□□□□ 0.82
USP39-208ENST00000455732 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
USP39-208ENST00000455732 SZT2Q5T011 3432 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 KBTBD13C9JR72 458 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 HMGB1P09429 215 aaKnown RBP20.17■□□□□ 0.82
USP39-208ENST00000455732 EXOSC10Q01780 885 aaKnown RBP20.17■□□□□ 0.82
USP39-208ENST00000455732 ADCK5Q3MIX3 580 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 NSMFQ6X4W1 530 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 DHX32Q7L7V1 743 aaKnown RBP20.17■□□□□ 0.82
USP39-208ENST00000455732 RGS22Q8NE09 1264 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 LENG1Q96BZ8 264 aaPredicted RBP20.17■□□□□ 0.82
USP39-208ENST00000455732 RIOX1Q9H6W3 641 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 ZHX1Q9UKY1 873 aaPredicted RBP20.17■□□□□ 0.82
USP39-208ENST00000455732 FAM184BQ9ULE4 1060 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 ABCB11O95342 1321 aa20.17■□□□□ 0.82
USP39-208ENST00000455732 LOC102724159A0A0B4J2E5 919 aa20.16■□□□□ 0.82
USP39-208ENST00000455732 DHX16O60231 1041 aaKnown RBP20.16■□□□□ 0.82
USP39-208ENST00000455732 ADAMTS4O75173 837 aa20.16■□□□□ 0.82
USP39-208ENST00000455732 PGK1P00558 417 aa20.16■□□□□ 0.82
USP39-208ENST00000455732 PWP2Q15269 919 aaKnown RBP20.16■□□□□ 0.82
USP39-208ENST00000455732 SLC35G1Q2M3R5 365 aa20.16■□□□□ 0.82
USP39-208ENST00000455732 FBXO11Q86XK2 927 aa20.16■□□□□ 0.82
USP39-208ENST00000455732 CCDC69A6NI79 296 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 ASB14A6NK59 587 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 ZBTB5O15062 677 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 ADCY6O43306 1168 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 CALM1P0DP23 149 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 CALM2P0DP24 149 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 CALM3P0DP25 149 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 KIF5BP33176 963 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 BAATQ14032 418 aaPredicted RBP20.15■□□□□ 0.82
USP39-208ENST00000455732 USH1GQ495M9 461 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 CTCFLQ8NI51 663 aaPredicted RBP20.15■□□□□ 0.82
USP39-208ENST00000455732 MORC4Q8TE76 937 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 NUP133Q8WUM0 1156 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 ZMYND8Q9ULU4 1186 aaPredicted RBP20.15■□□□□ 0.82
USP39-208ENST00000455732 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
USP39-208ENST00000455732 SYNRGQ9UMZ2 1314 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms