RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 ALPK3Q96L96 1907 aa8.22□□□□□ -1.09
COMMD1-205ENST00000455659 ABCB11O95342 1321 aa8.22□□□□□ -1.09
COMMD1-205ENST00000455659 KIAA1217Q5T5P2 1943 aa8.21□□□□□ -1.09
COMMD1-205ENST00000455659 KLF18A0A0U1RQI7 1052 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 PTPDC1A2A3K4 754 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 PALM3A6NDB9 673 aaPredicted RBP8.21□□□□□ -1.1
COMMD1-205ENST00000455659 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 ZBTB43O43298 467 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 PLEKHA8P1O95397 391 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 RPS6KB1P23443 525 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 CYP2C19P33261 490 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 RTN1Q16799 776 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 SLC30A10Q6XR72 485 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 SYNE3Q6ZMZ3 975 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 TMTC2Q8N394 836 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 SPZ1Q9BXG8 430 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 USP26Q9BXU7 913 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 UPF3BQ9BZI7 483 aaKnown RBP8.21□□□□□ -1.1
COMMD1-205ENST00000455659 PAK6Q9NQU5 681 aaPredicted RBP8.21□□□□□ -1.1
COMMD1-205ENST00000455659 SEC63Q9UGP8 760 aaKnown RBP8.21□□□□□ -1.1
COMMD1-205ENST00000455659 CNTNAP5Q8WYK1 1306 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 NID2Q14112 1375 aa8.21□□□□□ -1.1
COMMD1-205ENST00000455659 DNAJC25-GNG10A0A024R161 153 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 POTEB2H3BUK9 544 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 ZBTB5O15062 677 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 GJB1P08034 283 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 CYBAP13498 195 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 CCND3P30281 292 aaPredicted RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 GNAQP50148 359 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 RCAN1P53805 252 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 EXOSC10Q01780 885 aaKnown RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 CACNB2Q08289 660 aaPredicted RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 SLC35G1Q2M3R5 365 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 ZNF792Q3KQV3 632 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 Q6ZUG5 572 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 TMTC3Q6ZXV5 915 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 PIBF1Q8WXW3 757 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 BRF1Q92994 677 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 FGD4Q96M96 766 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 DEFB118Q96PH6 123 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 MAP3K14Q99558 947 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 JMJD4Q9H9V9 463 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 VAT1LQ9HCJ6 419 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 HMX1Q9NP08 348 aaPredicted RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 RBM28Q9NW13 759 aaKnown RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 CYP39A1Q9NYL5 469 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 ZHX1Q9UKY1 873 aaPredicted RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 DIS3Q9Y2L1 958 aaKnown RBP8.2□□□□□ -1.1
COMMD1-205ENST00000455659 GTF3C3Q9Y5Q9 886 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 RPTORQ8N122 1335 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 SYNGAP1Q96PV0 1343 aa8.2□□□□□ -1.1
COMMD1-205ENST00000455659 CYTH3O43739 400 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 PPP1R11O60927 126 aaPredicted RBP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 FARP2O94887 1054 aaPredicted RBP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 CALML3P27482 149 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 CNGA1P29973 690 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 GJA8P48165 433 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 ANAPC15P60006 121 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 APOBRQ0VD83 1088 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 RNF207Q6ZRF8 634 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 RUFY3Q7L099 469 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 ARMCX2Q7L311 632 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 ZNF467Q7Z7K2 595 aaPredicted RBP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 MSL3Q8N5Y2 521 aaKnown RBP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 FAM133AQ8N9E0 248 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 U2AF1L4Q8WU68 220 aaKnown RBP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 CLEC4DQ8WXI8 215 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 MTMR8Q96EF0 704 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 RRP36Q96EU6 259 aaKnown RBP8.19□□□□□ -1.1
COMMD1-205ENST00000455659 PIGSQ96S52 555 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 LZTS2Q9BRK4 669 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 TINF2Q9BSI4 451 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 AMNQ9BXJ7 453 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 RIOX1Q9H6W3 641 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 BRPF3Q9ULD4 1205 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 CNPY2Q9Y2B0 182 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 CYP46A1Q9Y6A2 500 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 ASTN1O14525 1302 aa8.19□□□□□ -1.1
COMMD1-205ENST00000455659 MSCO60682 206 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 EN2P19622 333 aaPredicted RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 ALDH5A1P51649 535 aaPredicted RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 RPS6P62753 249 aaKnown RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 CNTN2Q02246 1040 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 TRAF1Q13077 416 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 BAATQ14032 418 aaPredicted RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 SRBD1Q8N5C6 995 aaKnown RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 FANCBQ8NB91 859 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 TRPV1Q8NER1 839 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 LENG1Q96BZ8 264 aaPredicted RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 AGXT2Q9BYV1 514 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 TM6SF1Q9BZW5 370 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 ZSWIM6Q9HCJ5 1215 aa8.18□□□□□ -1.1
COMMD1-205ENST00000455659 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 ADD3Q9UEY8 706 aaKnown RBP8.18□□□□□ -1.1
COMMD1-205ENST00000455659 DDX20Q9UHI6 824 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms