RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 MCF2L2Q86YR7 1114 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 MAP3K20Q9NYL2 800 aaKnown RBP16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 STK36Q9NRP7 1315 aa16.53■□□□□ 0.24
HMGXB4-204ENST00000455359 A0A0G2JMZ2 1700 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 LARGE1O95461 756 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 PTPREP23469 700 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 GRB14Q14449 540 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 PFKFB3Q16875 520 aaPredicted RBP16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 PPP1R18Q6NYC8 613 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 WASF1Q92558 559 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 TMX3Q96JJ7 454 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 SLC5A4Q9NY91 659 aa16.52■□□□□ 0.24
HMGXB4-204ENST00000455359 PFASO15067 1338 aa16.52■□□□□ 0.23
HMGXB4-204ENST00000455359 PPP1R11O60927 126 aaPredicted RBP16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 DEXIO95424 95 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 SCG2P13521 617 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 GHRHRQ02643 423 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 MORN1Q5T089 497 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 WDR78Q5VTH9 848 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 MMP19Q99542 508 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 NUDT12Q9BQG2 462 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 SLC26A6Q9BXS9 759 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 GLT8D2Q9H1C3 349 aa16.51■□□□□ 0.23
HMGXB4-204ENST00000455359 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 HOXC6P09630 235 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 CTGFP29279 349 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 IRF5Q13568 498 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 PKN2Q16513 984 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 USH1GQ495M9 461 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 CTU1Q7Z7A3 348 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 ANKRD35Q8N283 1001 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 USP6NLQ92738 828 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 PHKBQ93100 1093 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 BARHL2Q9NY43 387 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 GJD2Q9UKL4 321 aa16.5■□□□□ 0.23
HMGXB4-204ENST00000455359 CTDNEP1O95476 244 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 RGS2P41220 211 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 SLC4A3P48751 1232 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 HMGN5P82970 282 aaKnown RBP16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 PKN1Q16512 942 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 OTOP1Q7RTM1 612 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 HEATR3Q7Z4Q2 680 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 TRMT44Q8IYL2 757 aaKnown RBP16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 PIBF1Q8WXW3 757 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 DDX11Q96FC9 970 aa16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 DIS3Q9Y2L1 958 aaKnown RBP16.49■□□□□ 0.23
HMGXB4-204ENST00000455359 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 ESYT2A0FGR8 921 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 XBP1P17861 261 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 ADORA2AP29274 412 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 MUM1L1Q5H9M0 696 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 WWC2Q6AWC2 1192 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 CCDC148Q8NFR7 591 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 SMARCC2Q8TAQ2 1214 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 A1CFQ9NQ94 594 aaKnown RBP16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 CYP39A1Q9NYL5 469 aa16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
HMGXB4-204ENST00000455359 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 hCG_1642624A0A1W2PR95 340 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 PTPDC1A2A3K4 754 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 STXBP3O00186 592 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 NFIBO00712 420 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 MRPL12P52815 198 aaKnown RBP16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 NAPAP54920 295 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 CUL4AQ13619 759 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 RNF207Q6ZRF8 634 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 DPP9Q86TI2 863 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 HSCBQ8IWL3 235 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 MSL3Q8N5Y2 521 aaKnown RBP16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 APBA2Q99767 749 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 PSTPIP2Q9H939 334 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
HMGXB4-204ENST00000455359 POTEB2H3BUK9 544 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 GCOM1H8Y6P7 765 aaPredicted RBP16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 POLR2MP0CAP2 368 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 GNA11P29992 359 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 FLT3LGP49771 235 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 HSD17B4P51659 736 aa16.46■□□□□ 0.23
HMGXB4-204ENST00000455359 PRKCZQ05513 592 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms