RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CAPN7Q9Y6W3 813 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 EIF3FO00303 357 aaPredicted RBP10.71□□□□□ -0.69
LINC01940-201ENST00000455228 ZBTB43O43298 467 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 BCRP11274 1271 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 CNGA1P29973 690 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 ADORA1P30542 326 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 BCL2A1Q16548 175 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 LRP10Q7Z4F1 713 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 LCA5Q86VQ0 697 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 CPLX3Q8WVH0 158 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 RSPH1Q8WYR4 309 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 TRIM4Q9C037 500 aa10.71□□□□□ -0.69
LINC01940-201ENST00000455228 ZBED4O75132 1171 aa10.71□□□□□ -0.7
LINC01940-201ENST00000455228 ZAP70P43403 619 aa10.71□□□□□ -0.7
LINC01940-201ENST00000455228 SESTD1Q86VW0 696 aa10.71□□□□□ -0.7
LINC01940-201ENST00000455228 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.7
LINC01940-201ENST00000455228 ZBTB8BQ8NAP8 495 aaPredicted RBP10.71□□□□□ -0.7
LINC01940-201ENST00000455228 SLC26A6Q9BXS9 759 aa10.71□□□□□ -0.7
LINC01940-201ENST00000455228 NRDE2Q9H7Z3 1164 aa10.71□□□□□ -0.7
LINC01940-201ENST00000455228 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.7
LINC01940-201ENST00000455228 CROTQ9UKG9 612 aa10.71□□□□□ -0.7
LINC01940-201ENST00000455228 FOXN1O15353 648 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 PSMD7P51665 324 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 CHMP4BP1P59074 171 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 ZNF827Q17R98 1081 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 CCDC40Q4G0X9 1142 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 FOXP4Q8IVH2 680 aaPredicted RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 ACTR5Q9H9F9 607 aaPredicted RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 N6AMT1Q9Y5N5 214 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 USP54Q70EL1 1684 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 HMGB1P1B2RPK0 211 aaPredicted RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 POLR2DO15514 142 aaKnown RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 VIMP08670 466 aaKnown RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 CDC27P30260 824 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 XRCC4Q13426 336 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 LBRQ14739 615 aaKnown RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 PTPAQ15257 358 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 TMEM139Q8IV31 216 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 TEX9Q8N6V9 391 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 TC2NQ8N9U0 490 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 MLKLQ8NB16 471 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 IFT43Q96FT9 208 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 SPAG5Q96R06 1193 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 G3BP2Q9UN86 482 aaKnown RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 B4E1Z4 1266 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 EIF3HO15372 352 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 CIAO1O76071 339 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 ALDH2P05091 517 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 IRAK1P51617 712 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 SKOR1P84550 965 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 APOA5Q6Q788 366 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 PI16Q6UXB8 463 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 KRT28Q7Z3Y7 464 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 NCSTNQ92542 709 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 DHTKD1Q96HY7 919 aaPredicted RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 MYL10Q9BUA6 226 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 SLC40A1Q9NP59 571 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 INTS13Q9NVM9 706 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 KIAA1522Q9P206 1035 aaPredicted RBP10.7□□□□□ -0.7
LINC01940-201ENST00000455228 ATXN10Q9UBB4 475 aa10.7□□□□□ -0.7
LINC01940-201ENST00000455228 KDM6AO15550 1401 aaPredicted RBP10.69□□□□□ -0.7
LINC01940-201ENST00000455228 AKR1B15C9JRZ8 316 aaPredicted RBP10.69□□□□□ -0.7
LINC01940-201ENST00000455228 P4HA2O15460 535 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 IDH1O75874 414 aaKnown RBP10.69□□□□□ -0.7
LINC01940-201ENST00000455228 ALADP13716 330 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 SSRP1Q08945 709 aaKnown RBP10.69□□□□□ -0.7
LINC01940-201ENST00000455228 TMEM67Q5HYA8 995 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 SLC9C2Q5TAH2 1124 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 AFAP1L1Q8TED9 768 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 TAF4BQ92750 862 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 FAM204AQ9H8W3 233 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
LINC01940-201ENST00000455228 NAT2P11245 290 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 SCNN1BP51168 640 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 SCARF1Q14162 830 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 FUKQ8N0W3 1084 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 MAP3K14Q99558 947 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.69□□□□□ -0.7
LINC01940-201ENST00000455228 SLC12A7Q9Y666 1083 aa10.69□□□□□ -0.7
LINC01940-201ENST00000455228 FOXP2O15409 715 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 ZNF189O75820 626 aaPredicted RBP10.68□□□□□ -0.7
LINC01940-201ENST00000455228 CUL4BQ13620 913 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 NAA25Q14CX7 972 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 CCDC92Q53HC0 331 aaPredicted RBP10.68□□□□□ -0.7
LINC01940-201ENST00000455228 TMEM110Q86TL2 294 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 ANKLE2Q86XL3 938 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 CCHCR1Q8TD31 782 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 DUSP9Q99956 384 aaKnown RBP10.68□□□□□ -0.7
LINC01940-201ENST00000455228 ANKZF1Q9H8Y5 726 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 SAMSN1Q9NSI8 373 aaKnown RBP10.68□□□□□ -0.7
LINC01940-201ENST00000455228 SERTAD1Q9UHV2 236 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 DENND2AQ9ULE3 1009 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 AFDNP55196 1824 aaKnown RBP10.68□□□□□ -0.7
LINC01940-201ENST00000455228 ZFXP17010 805 aaPredicted RBP10.68□□□□□ -0.7
LINC01940-201ENST00000455228 BMP6P22004 513 aa10.68□□□□□ -0.7
LINC01940-201ENST00000455228 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms