RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 LINC01465Q8N7H1 131 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 FAM133AQ8N9E0 248 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 MED15Q96RN5 788 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 SENP7Q9BQF6 1050 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 PDLIM7Q9NR12 457 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 FEM1BQ9UK73 627 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 BPTFQ12830 3046 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 SCG2P13521 617 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 PDIA4P13667 645 aaKnown RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 RXRAP19793 462 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 SARSP49591 514 aaKnown RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 ATP2C1P98194 919 aaPredicted RBP5.76□□□□□ -1.49
RIF1-207ENST00000454583 FAM43AQ8N2R8 423 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 LINC00301Q8NCQ3 95 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 CTAGE1Q96RT6 745 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 UBIAD1Q9Y5Z9 338 aa5.76□□□□□ -1.49
RIF1-207ENST00000454583 SCN5AQ14524 2016 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 MINDY4BA8MYZ0 360 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 H7C1D1 291 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 STX6O43752 255 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 HOXC6P09630 235 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 GRB14Q14449 540 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 QRICH1Q2TAL8 776 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 IFIT1BQ5T764 474 aaKnown RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 CCSAPQ6IQ19 270 aaPredicted RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 ERO1BQ86YB8 467 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 RIOX2Q8IUF8 465 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 LRRC47Q8N1G4 583 aaKnown RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 SHCBP1Q8NEM2 672 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 PIGSQ96S52 555 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 FIZ1Q96SL8 496 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 NUP88Q99567 741 aaPredicted RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 PANK2Q9BZ23 570 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 PCDHA4Q9UN74 947 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 TELO2Q9Y4R8 837 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 PCDHA2Q9Y5H9 948 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 LOC102724159A0A0B4J2E5 919 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 FRMD3A2A2Y4 597 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 ICAM3P32942 547 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 METAP2P50579 478 aaKnown RBP eCLIP5.75□□□□□ -1.49
RIF1-207ENST00000454583 ICA1Q05084 483 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 MTMR2Q13614 643 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 PWP2Q15269 919 aaKnown RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 KRT40Q6A162 431 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 ZC3H3Q8IXZ2 948 aaKnown RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 ANKRD13AQ8IZ07 590 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 JMYQ8N9B5 988 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 RBSNQ9H1K0 784 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 PLXNA3P51805 1871 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 COL4A2P08572 1712 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 KLRF2D3W0D1 207 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 IFIT3O14879 490 aaKnown RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 TSPY3P0CV98 308 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 TSPY8P0CW00 308 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 GALNT17Q6IS24 598 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 SHC4Q6S5L8 630 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 NIPA1Q7RTP0 329 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 TBC1D5Q92609 795 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 EMID1Q96A84 441 aaPredicted RBP5.75□□□□□ -1.49
RIF1-207ENST00000454583 OPTNQ96CV9 577 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 FTOQ9C0B1 505 aaKnown RBP eCLIP5.75□□□□□ -1.49
RIF1-207ENST00000454583 FBXO28Q9NVF7 368 aa5.75□□□□□ -1.49
RIF1-207ENST00000454583 SOWAHBA6NEL2 793 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 GOLGA8BA8MQT2 603 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 ZBTB42B2RXF5 422 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 BTBD19C9JJ37 291 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 PPP6R2O75170 966 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 MCCP23508 829 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 RTN1Q16799 776 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 FAM83BQ5T0W9 1011 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 MAP3K21Q5TCX8 1036 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 MAP1SQ66K74 1059 aaPredicted RBP5.74□□□□□ -1.49
RIF1-207ENST00000454583 PDXDC2PQ6P474 469 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 CCDC62Q6P9F0 684 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 LRSAM1Q6UWE0 723 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 OGFOD1Q8N543 542 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 FAM86B1E9PN63 330 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 PEX10O60683 326 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 FAM86B2P0C5J1 330 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 GOLGA8HP0CJ92 632 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 PRPHP41219 470 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 TNNI2P48788 182 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 TMEM119Q4V9L6 283 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 COBLL1Q53SF7 1204 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 ATL3Q6DD88 541 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 DPY19L2P1Q6NXN4 242 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 KIAA1211Q6ZU35 1233 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 KRT26Q7Z3Y9 468 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 VWCEQ96DN2 955 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 WRAP73Q9P2S5 460 aaPredicted RBP5.74□□□□□ -1.49
RIF1-207ENST00000454583 CLIP2Q9UDT6 1046 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 ARIH1Q9Y4X5 557 aaPredicted RBP5.74□□□□□ -1.49
RIF1-207ENST00000454583 GJA3Q9Y6H8 435 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 KIAA1549LQ6ZVL6 1849 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 DENND4CQ5VZ89 1909 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 TRIP11Q15643 1979 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 XIRP2A4UGR9 3374 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 PLXNA4Q9HCM2 1894 aa5.74□□□□□ -1.49
RIF1-207ENST00000454583 SLC37A4O43826 429 aa5.73□□□□□ -1.49
RIF1-207ENST00000454583 HLA-DOAP06340 250 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms