RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 ADCYAP1R1P41586 468 aa14.12□□□□□ -0.15
USP40-210ENST00000454354 MAGEA10P43363 369 aaPredicted RBP14.12□□□□□ -0.15
USP40-210ENST00000454354 ATN1P54259 1190 aaPredicted RBP14.12□□□□□ -0.15
USP40-210ENST00000454354 PTH1RQ03431 593 aa14.12□□□□□ -0.15
USP40-210ENST00000454354 SLC39A5Q6ZMH5 540 aa14.12□□□□□ -0.15
USP40-210ENST00000454354 TSEN34Q9BSV6 310 aaKnown RBP14.12□□□□□ -0.15
USP40-210ENST00000454354 UPF3AQ9H1J1 476 aaKnown RBP14.12□□□□□ -0.15
USP40-210ENST00000454354 KAT14Q9H8E8 782 aa14.12□□□□□ -0.15
USP40-210ENST00000454354 LOC102724159A0A0B4J2E5 919 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 ADCY6O43306 1168 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 CST5P28325 142 aaPredicted RBP14.11□□□□□ -0.15
USP40-210ENST00000454354 PWP2Q15269 919 aaKnown RBP14.11□□□□□ -0.15
USP40-210ENST00000454354 SEC23AQ15436 765 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 ASPRV1Q53RT3 343 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 KLHDC9Q8NEP7 349 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 MORC4Q8TE76 937 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 UBAC1Q9BSL1 405 aa14.11□□□□□ -0.15
USP40-210ENST00000454354 BAZ2BQ9UIF8 2168 aaKnown RBP14.11□□□□□ -0.15
USP40-210ENST00000454354 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
USP40-210ENST00000454354 LAMA2P24043 3122 aaKnown RBP14.11□□□□□ -0.15
USP40-210ENST00000454354 A0A1W2PQ45 241 aaPredicted RBP14.1□□□□□ -0.15
USP40-210ENST00000454354 A0A1W2PQY0 241 aa14.1□□□□□ -0.15
USP40-210ENST00000454354 NFIBO00712 420 aa14.1□□□□□ -0.15
USP40-210ENST00000454354 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
USP40-210ENST00000454354 GOLGA8HP0CJ92 632 aa14.1□□□□□ -0.15
USP40-210ENST00000454354 NKX3-2P78367 333 aa14.1□□□□□ -0.15
USP40-210ENST00000454354 CCSAPQ6IQ19 270 aaPredicted RBP14.1□□□□□ -0.15
USP40-210ENST00000454354 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
USP40-210ENST00000454354 CLEC4DQ8WXI8 215 aa14.1□□□□□ -0.15
USP40-210ENST00000454354 MOXD2PA6NHM9 499 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 GJA9P57773 515 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 TRDNQ13061 729 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 TRIM60Q495X7 471 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 CYB5R4Q7L1T6 521 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
USP40-210ENST00000454354 MAP4K1Q92918 833 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 MAF1Q9H063 256 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
USP40-210ENST00000454354 MYADML2A6NDP7 307 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 ALDH5A1P51649 535 aaPredicted RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 ACLYP53396 1101 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 BAATQ14032 418 aaPredicted RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 CDC37Q16543 378 aaPredicted RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 IFIT1BQ5T764 474 aaKnown RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 SLC30A10Q6XR72 485 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 PCSK9Q8NBP7 692 aaKnown RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 RGS22Q8NE09 1264 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 UBA5Q9GZZ9 404 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 CPVLQ9H3G5 476 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 VTA1Q9NP79 307 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 PDLIM7Q9NR12 457 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 ADD3Q9UEY8 706 aaKnown RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 GNEQ9Y223 722 aaKnown RBP14.08□□□□□ -0.16
USP40-210ENST00000454354 TAF6LQ9Y6J9 622 aa14.08□□□□□ -0.16
USP40-210ENST00000454354 PTPDC1A2A3K4 754 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 E7EWF7 191 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 CTAGE5O15320 804 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
USP40-210ENST00000454354 C6orf222P0C671 652 aaPredicted RBP14.07□□□□□ -0.16
USP40-210ENST00000454354 TNFAIP2Q03169 654 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 KCNA10Q16322 511 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 TAPT1Q6NXT6 567 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 RNF207Q6ZRF8 634 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 STOX1Q6ZVD7 989 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 ADGRF4Q8IZF3 695 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 TDHQ8IZJ6 230 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 NUP133Q8WUM0 1156 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 PURBQ96QR8 312 aaKnown RBP14.07□□□□□ -0.16
USP40-210ENST00000454354 UBE2OQ9C0C9 1292 aaKnown RBP14.07□□□□□ -0.16
USP40-210ENST00000454354 SPC25Q9HBM1 224 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 PRKAG2Q9UGJ0 569 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 DDX49Q9Y6V7 483 aaKnown RBP14.07□□□□□ -0.16
USP40-210ENST00000454354 ABCB11O95342 1321 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 SCN10AQ9Y5Y9 1956 aa14.07□□□□□ -0.16
USP40-210ENST00000454354 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.06□□□□□ -0.16
USP40-210ENST00000454354 RPS6P62753 249 aaKnown RBP14.06□□□□□ -0.16
USP40-210ENST00000454354 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
USP40-210ENST00000454354 TLE2Q04725 743 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 LRIT3Q3SXY7 679 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 USH1GQ495M9 461 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 BMP2KLQ5H9B9 411 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 FBXO16Q8IX29 292 aaPredicted RBP14.06□□□□□ -0.16
USP40-210ENST00000454354 DNERQ8NFT8 737 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 NCOA7Q8NI08 942 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 TOX2Q96NM4 488 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 LSG1Q9H089 658 aaKnown RBP14.06□□□□□ -0.16
USP40-210ENST00000454354 JMJD4Q9H9V9 463 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 STARD7Q9NQZ5 370 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 PCDH10Q9P2E7 1040 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 MAD2L2Q9UI95 211 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 Q9Y3F1 56 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
USP40-210ENST00000454354 ELP1O95163 1332 aa14.06□□□□□ -0.16
USP40-210ENST00000454354 MYH7BA7E2Y1 1941 aa14.05□□□□□ -0.16
USP40-210ENST00000454354 PALM3A6NDB9 673 aaPredicted RBP14.05□□□□□ -0.16
USP40-210ENST00000454354 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
USP40-210ENST00000454354 ASGR1P07306 291 aa14.05□□□□□ -0.16
USP40-210ENST00000454354 SMPD1P17405 629 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms