RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
VPS16-205ENST00000453689 CATIPQ7Z7H3 387 aa17.06■□□□□ 0.32
VPS16-205ENST00000453689 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
VPS16-205ENST00000453689 FGD4Q96M96 766 aa17.06■□□□□ 0.32
VPS16-205ENST00000453689 TINF2Q9BSI4 451 aa17.06■□□□□ 0.32
VPS16-205ENST00000453689 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
VPS16-205ENST00000453689 PFASO15067 1338 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 DHX16O60231 1041 aaKnown RBP17.05■□□□□ 0.32
VPS16-205ENST00000453689 CAPN2P17655 700 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 CNGA1P29973 690 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 CNTN2Q02246 1040 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 PRAMEF19Q5SWL8 479 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 ZNF467Q7Z7K2 595 aaPredicted RBP17.05■□□□□ 0.32
VPS16-205ENST00000453689 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 JMJD4Q9H9V9 463 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 ZSWIM6Q9HCJ5 1215 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 PNMA2Q9UL42 364 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
VPS16-205ENST00000453689 POTEB2H3BUK9 544 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 NFIBO00712 420 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 DDAH1O94760 285 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 LIFRP42702 1097 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
VPS16-205ENST00000453689 SLC35G1Q2M3R5 365 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 QRICH1Q2TAL8 776 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 USH1GQ495M9 461 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 LHX8Q68G74 356 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 MAMDC4Q6UXC1 1216 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 NSMFQ6X4W1 530 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 NFXL1Q6ZNB6 911 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 UBE2Q1Q7Z7E8 422 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
VPS16-205ENST00000453689 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 CLEC4DQ8WXI8 215 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 TCEANC2Q96MN5 208 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 MAP3K14Q99558 947 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 OGDHLQ9ULD0 1010 aa17.04■□□□□ 0.32
VPS16-205ENST00000453689 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
VPS16-205ENST00000453689 SOWAHBA6NEL2 793 aa17.03■□□□□ 0.32
VPS16-205ENST00000453689 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
VPS16-205ENST00000453689 FARP2O94887 1054 aaPredicted RBP17.03■□□□□ 0.32
VPS16-205ENST00000453689 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
VPS16-205ENST00000453689 MTMR8Q96EF0 704 aa17.03■□□□□ 0.32
VPS16-205ENST00000453689 DDX20Q9UHI6 824 aaKnown RBP17.03■□□□□ 0.32
VPS16-205ENST00000453689 CYP46A1Q9Y6A2 500 aa17.03■□□□□ 0.32
VPS16-205ENST00000453689 ASTN1O14525 1302 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 ABCB11O95342 1321 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 SEPT4O43236 478 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 CYTH3O43739 400 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 SNAI1O95863 264 aaPredicted RBP17.02■□□□□ 0.32
VPS16-205ENST00000453689 CPA1P15085 419 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 BAATQ14032 418 aaPredicted RBP17.02■□□□□ 0.32
VPS16-205ENST00000453689 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 FBXO11Q86XK2 927 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 ANKLE1Q8NAG6 615 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 UPF3BQ9BZI7 483 aaKnown RBP17.02■□□□□ 0.32
VPS16-205ENST00000453689 RIOX1Q9H6W3 641 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.32
VPS16-205ENST00000453689 MSCO60682 206 aa17.01■□□□□ 0.31
VPS16-205ENST00000453689 RXRAP19793 462 aa17.01■□□□□ 0.31
VPS16-205ENST00000453689 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
VPS16-205ENST00000453689 SLC30A10Q6XR72 485 aa17.01■□□□□ 0.31
VPS16-205ENST00000453689 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
VPS16-205ENST00000453689 DIS3LQ8TF46 1054 aaKnown RBP17.01■□□□□ 0.31
VPS16-205ENST00000453689 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
VPS16-205ENST00000453689 KIF2CQ99661 725 aa17.01■□□□□ 0.31
VPS16-205ENST00000453689 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.01■□□□□ 0.31
VPS16-205ENST00000453689 MYH7BA7E2Y1 1941 aa17.01■□□□□ 0.31
VPS16-205ENST00000453689 PTPDC1A2A3K4 754 aa17■□□□□ 0.31
VPS16-205ENST00000453689 ZBTB5O15062 677 aa17■□□□□ 0.31
VPS16-205ENST00000453689 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
VPS16-205ENST00000453689 ZNF865P0CJ78 1059 aaPredicted RBP17■□□□□ 0.31
VPS16-205ENST00000453689 CALM1P0DP23 149 aa17■□□□□ 0.31
VPS16-205ENST00000453689 CALM2P0DP24 149 aa17■□□□□ 0.31
VPS16-205ENST00000453689 CALM3P0DP25 149 aa17■□□□□ 0.31
VPS16-205ENST00000453689 KIF5BP33176 963 aa17■□□□□ 0.31
VPS16-205ENST00000453689 FGD1P98174 961 aa17■□□□□ 0.31
VPS16-205ENST00000453689 ANO1Q5XXA6 986 aa17■□□□□ 0.31
VPS16-205ENST00000453689 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
VPS16-205ENST00000453689 ARMCX2Q7L311 632 aa17■□□□□ 0.31
VPS16-205ENST00000453689 HOMER1Q86YM7 354 aa17■□□□□ 0.31
VPS16-205ENST00000453689 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
VPS16-205ENST00000453689 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
VPS16-205ENST00000453689 PAWRQ96IZ0 340 aaKnown RBP17■□□□□ 0.31
VPS16-205ENST00000453689 PIGSQ96S52 555 aa17■□□□□ 0.31
VPS16-205ENST00000453689 AMNQ9BXJ7 453 aa17■□□□□ 0.31
VPS16-205ENST00000453689 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
VPS16-205ENST00000453689 SLC12A7Q9Y666 1083 aa17■□□□□ 0.31
VPS16-205ENST00000453689 CALML3P27482 149 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 RPS6P62753 249 aaKnown RBP16.99■□□□□ 0.31
VPS16-205ENST00000453689 RABEP1Q15276 862 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 APOA5Q6Q788 366 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 Q6ZUG5 572 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 FBXL16Q8N461 479 aa16.99■□□□□ 0.31
VPS16-205ENST00000453689 SPZ1Q9BXG8 430 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms