RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 ABCB11O95342 1321 aa16.92■□□□□ 0.3
NCKIPSD-207ENST00000453349 NID2Q14112 1375 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 CPLX1O14810 134 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 RGS2P41220 211 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 MAP2K5Q13163 448 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 GRB14Q14449 540 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 SLC35G1Q2M3R5 365 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 PCDHA1Q9Y5I3 950 aa16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 V9GY48 417 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-207ENST00000453349 PFKFB2O60825 505 aa16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 CYP2B6P20813 491 aa16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 ADORA2AP29274 412 aa16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 IRF5Q13568 498 aa16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 ZSCAN31Q96LW9 406 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 NCOA5Q9HCD5 579 aaKnown RBP16.9■□□□□ 0.3
NCKIPSD-207ENST00000453349 ZSWIM8A7E2V4 1837 aa16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 COL13A1Q5TAT6 717 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 NSMFQ6X4W1 530 aa16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 USP6NLQ92738 828 aa16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 MAF1Q9H063 256 aa16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 RBM27Q9P2N5 1060 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 PTCH2Q9Y6C5 1203 aa16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 PFASO15067 1338 aa16.89■□□□□ 0.29
NCKIPSD-207ENST00000453349 PTPDC1A2A3K4 754 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 PRPF3O43395 683 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 ADCY3O60266 1144 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 PPP1R11O60927 126 aaPredicted RBP16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 CDKL5O76039 1030 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 IFNAR1P17181 557 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 MCM2P49736 904 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 FUT2Q10981 343 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 SCRN1Q12765 414 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 ME3Q16798 604 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 RGS22Q8NE09 1264 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 PXYLP1Q8TE99 480 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 APBA2Q99767 749 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 MCOLN1Q9GZU1 580 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 DIS3Q9Y2L1 958 aaKnown RBP16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
NCKIPSD-207ENST00000453349 PCNTO95613 3336 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 hCG_1642624A0A1W2PR95 340 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 NFIBO00712 420 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 COBLO75128 1261 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 PGK2P07205 417 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 NTRK3Q16288 839 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 RNF207Q6ZRF8 634 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 SAMD3Q8N6K7 520 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 SLAIN1Q8ND83 568 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 NPLOC4Q8TAT6 608 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 SLC26A6Q9BXS9 759 aa16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 RNF26Q9BY78 433 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 A1CFQ9NQ94 594 aaKnown RBP16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 BIN2Q9UBW5 565 aaPredicted RBP16.87■□□□□ 0.29
NCKIPSD-207ENST00000453349 PLXNB2O15031 1838 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 HOXC6P09630 235 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 GRK4P32298 578 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 BAATQ14032 418 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 ZNF792Q3KQV3 632 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 SLC9C1Q4G0N8 1177 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 HEATR3Q7Z4Q2 680 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 NECAB1Q8N987 351 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 PHKBQ93100 1093 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 MAP3K20Q9NYL2 800 aaKnown RBP16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 CYP39A1Q9NYL5 469 aa16.86■□□□□ 0.29
NCKIPSD-207ENST00000453349 DNAJC25-GNG10A0A024R161 153 aa16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 LARGE1O95461 756 aa16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 CFBP00751 764 aa16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 CALML3P27482 149 aa16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 PFKFB3Q16875 520 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 GTF3C6Q969F1 213 aa16.85■□□□□ 0.29
NCKIPSD-207ENST00000453349 SCG2P13521 617 aa16.84■□□□□ 0.29
NCKIPSD-207ENST00000453349 ELNP15502 786 aa16.84■□□□□ 0.29
NCKIPSD-207ENST00000453349 RPS6P62753 249 aaKnown RBP16.84■□□□□ 0.29
NCKIPSD-207ENST00000453349 UBXN2AP68543 259 aa16.84■□□□□ 0.29
NCKIPSD-207ENST00000453349 CUL5Q93034 780 aa16.84■□□□□ 0.29
NCKIPSD-207ENST00000453349 MAML3Q96JK9 1138 aa16.84■□□□□ 0.29
NCKIPSD-207ENST00000453349 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 PPFIA3O75145 1194 aa16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 DEXIO95424 95 aa16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 MYH6P13533 1939 aa16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 NAPAP54920 295 aa16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 CNTN2Q02246 1040 aa16.83■□□□□ 0.28
NCKIPSD-207ENST00000453349 CCL14Q16627 93 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms