RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 MARCH6O60337 910 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 TERF1P54274 439 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 CALCRLQ16602 461 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 CCAR2Q8N163 923 aaKnown RBP13.28□□□□□ -0.28
VTA1-203ENST00000452973 TTLL6Q8N841 843 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 MYRIPQ8NFW9 859 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
VTA1-203ENST00000452973 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
VTA1-203ENST00000452973 ZBTB5O15062 677 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 GH2P01242 217 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
VTA1-203ENST00000452973 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 EHD4Q9H223 541 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 PSTPIP2Q9H939 334 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 LAD1O00515 517 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 TAL1P17542 331 aaPredicted RBP13.28□□□□□ -0.28
VTA1-203ENST00000452973 PRCPP42785 496 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 JAG1P78504 1218 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 USH1GQ495M9 461 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 NELFBQ8WX92 580 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 ARID3AQ99856 593 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 VEZTQ9HBM0 779 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 PCDHA1Q9Y5I3 950 aa13.28□□□□□ -0.28
VTA1-203ENST00000452973 FOCADQ5VW36 1801 aa13.27□□□□□ -0.28
VTA1-203ENST00000452973 POTEMA6NI47 508 aa13.27□□□□□ -0.28
VTA1-203ENST00000452973 E4F1Q66K89 784 aaPredicted RBP13.27□□□□□ -0.28
VTA1-203ENST00000452973 TRIM49BA6NDI0 452 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 F5H6K3 240 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
VTA1-203ENST00000452973 DPEP1P16444 411 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 KLRC3Q07444 240 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 KMT5BQ4FZB7 885 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 SPECC1LQ69YQ0 1117 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 CUL5Q93034 780 aa13.27□□□□□ -0.29
VTA1-203ENST00000452973 PSMD14O00487 310 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 PRPHP41219 470 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 PAK1Q13153 545 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 ZNF658Q5TYW1 1059 aaPredicted RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 CC2D2BQ6DHV5 1058 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 SUPT20HQ8NEM7 779 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 CCSER1Q9C0I3 900 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 VPS16Q9H269 839 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 LRWD1Q9UFC0 647 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 ESYT2A0FGR8 921 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 SIAH1Q8IUQ4 282 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 RMND1Q9NWS8 449 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 MYO3BQ8WXR4 1341 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 MYO1BO43795 1136 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 MRPL12P52815 198 aaKnown RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 ASIC1P78348 528 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 CDC37Q16543 378 aaPredicted RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 RBM26Q5T8P6 1007 aaKnown RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 HPS3Q969F9 1004 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 CDK5RAP3Q96JB5 506 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
VTA1-203ENST00000452973 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
VTA1-203ENST00000452973 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.26□□□□□ -0.29
VTA1-203ENST00000452973 hCG_1984214I3L0E3 225 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 ZYXQ15942 572 aaKnown RBP13.25□□□□□ -0.29
VTA1-203ENST00000452973 CCDC93Q567U6 631 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 TMEM179Q6ZVK1 233 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 ZNF713Q8N859 430 aaPredicted RBP13.25□□□□□ -0.29
VTA1-203ENST00000452973 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 PKNOX2Q96KN3 472 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
VTA1-203ENST00000452973 NR1I3Q14994 352 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 TAB2Q9NYJ8 693 aa13.25□□□□□ -0.29
VTA1-203ENST00000452973 N4BP3O15049 544 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 EDIL3O43854 480 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 PDE4DQ08499 809 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 TMEM266Q2M3C6 531 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 TATDN1Q6P1N9 297 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 DYMQ7RTS9 669 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 PPP1R13BQ96KQ4 1090 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 AK8Q96MA6 479 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 MMTAG2Q9BU76 263 aaKnown RBP13.24□□□□□ -0.29
VTA1-203ENST00000452973 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 DDX25Q9UHL0 483 aaKnown RBP13.24□□□□□ -0.29
VTA1-203ENST00000452973 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 DYNC1I1O14576 645 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 NDUFB10O96000 172 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 ECE1P42892 770 aa13.24□□□□□ -0.29
VTA1-203ENST00000452973 PMS1P54277 932 aaKnown RBP13.24□□□□□ -0.29
VTA1-203ENST00000452973 FILIP1LQ4L180 1135 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms