RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ACLYP53396 1101 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
CHD3-206ENST00000452447 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 KRT23Q9C075 422 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 STARD7Q9NQZ5 370 aa15.12■□□□□ 0.01
CHD3-206ENST00000452447 MOXD2PA6NHM9 499 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 TLE2Q04725 743 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 KCNA10Q16322 511 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 PCSK9Q8NBP7 692 aaKnown RBP15.11■□□□□ 0.01
CHD3-206ENST00000452447 KLHDC9Q8NEP7 349 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 RUFY2Q8WXA3 655 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
CHD3-206ENST00000452447 KAT14Q9H8E8 782 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 ADD3Q9UEY8 706 aaKnown RBP15.11■□□□□ 0.01
CHD3-206ENST00000452447 MYH6P13533 1939 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 PQBP1O60828 265 aaKnown RBP15.11■□□□□ 0.01
CHD3-206ENST00000452447 CST5P28325 142 aaPredicted RBP15.11■□□□□ 0.01
CHD3-206ENST00000452447 TNFAIP2Q03169 654 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 GNASQ5JWF2 1037 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 PNMA1Q8ND90 353 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 VTI1AQ96AJ9 217 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 KATNBL1Q9H079 304 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 PDLIM7Q9NR12 457 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 ZSWIM5Q9P217 1185 aa15.11■□□□□ 0.01
CHD3-206ENST00000452447 RAD50Q92878 1312 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 PTPDC1A2A3K4 754 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 MYADML2A6NDP7 307 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 ADCY6O43306 1168 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 CLTBP09497 229 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 GOLGA8HP0CJ92 632 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 GJA9P57773 515 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 BAATQ14032 418 aaPredicted RBP15.1■□□□□ 0.01
CHD3-206ENST00000452447 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 UBAC1Q9BSL1 405 aa15.1■□□□□ 0.01
CHD3-206ENST00000452447 DCDC2CA8MYV0 355 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 NFIBO00712 420 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 ASGR1P07306 291 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
CHD3-206ENST00000452447 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
CHD3-206ENST00000452447 ANKS1AQ92625 1134 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 UPF3AQ9H1J1 476 aaKnown RBP15.09■□□□□ 0.01
CHD3-206ENST00000452447 IL25Q9H293 177 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 LTBP2Q14767 1821 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 TNKSO95271 1327 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 WDR19Q8NEZ3 1342 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 LCTP09848 1927 aa15.09■□□□□ 0.01
CHD3-206ENST00000452447 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.08■□□□□ 0
CHD3-206ENST00000452447 TRIM43BA6NCK2 446 aa15.08■□□□□ 0
CHD3-206ENST00000452447 CHMLP26374 656 aa15.08■□□□□ 0
CHD3-206ENST00000452447 CALML3P27482 149 aa15.08■□□□□ 0
CHD3-206ENST00000452447 IRX5P78411 483 aaPredicted RBP15.08■□□□□ 0
CHD3-206ENST00000452447 TRDNQ13061 729 aa15.08■□□□□ 0
CHD3-206ENST00000452447 GPR153Q6NV75 609 aa15.08■□□□□ 0
CHD3-206ENST00000452447 RNF207Q6ZRF8 634 aa15.08■□□□□ 0
CHD3-206ENST00000452447 SH3RF1Q7Z6J0 888 aa15.08■□□□□ 0
CHD3-206ENST00000452447 FBXO16Q8IX29 292 aaPredicted RBP15.08■□□□□ 0
CHD3-206ENST00000452447 BADQ92934 168 aa15.08■□□□□ 0
CHD3-206ENST00000452447 TRIM43Q96BQ3 446 aaPredicted RBP15.08■□□□□ 0
CHD3-206ENST00000452447 PURBQ96QR8 312 aaKnown RBP15.08■□□□□ 0
CHD3-206ENST00000452447 UBA5Q9GZZ9 404 aa15.08■□□□□ 0
CHD3-206ENST00000452447 AP5M1Q9H0R1 490 aa15.08■□□□□ 0
CHD3-206ENST00000452447 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
CHD3-206ENST00000452447 ASTN1O14525 1302 aa15.08■□□□□ 0
CHD3-206ENST00000452447 ELP1O95163 1332 aa15.08■□□□□ 0
CHD3-206ENST00000452447 COL6A3P12111 3177 aa15.08■□□□□ 0
CHD3-206ENST00000452447 DHX16O60231 1041 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 USH1GQ495M9 461 aa15.07■□□□□ 0
CHD3-206ENST00000452447 ASPRV1Q53RT3 343 aa15.07■□□□□ 0
CHD3-206ENST00000452447 IFIT1BQ5T764 474 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 IQSEC1Q6DN90 963 aa15.07■□□□□ 0
CHD3-206ENST00000452447 TLK2Q86UE8 772 aa15.07■□□□□ 0
CHD3-206ENST00000452447 CLEC4DQ8WXI8 215 aa15.07■□□□□ 0
CHD3-206ENST00000452447 TOX2Q96NM4 488 aa15.07■□□□□ 0
CHD3-206ENST00000452447 MPHOSPH6Q99547 160 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 CPVLQ9H3G5 476 aa15.07■□□□□ 0
CHD3-206ENST00000452447 VTA1Q9NP79 307 aa15.07■□□□□ 0
CHD3-206ENST00000452447 TMEM39AQ9NV64 488 aa15.07■□□□□ 0
CHD3-206ENST00000452447 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 MROH7Q68CQ1 1323 aa15.07■□□□□ 0
CHD3-206ENST00000452447 LOC102724159A0A0B4J2E5 919 aa15.07■□□□□ 0
CHD3-206ENST00000452447 PARP1P09874 1014 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 RAG1P15918 1043 aa15.07■□□□□ 0
CHD3-206ENST00000452447 ALDH5A1P51649 535 aaPredicted RBP15.07■□□□□ 0
CHD3-206ENST00000452447 BEX3Q00994 111 aa15.07■□□□□ 0
CHD3-206ENST00000452447 PWP2Q15269 919 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 SLC30A10Q6XR72 485 aa15.07■□□□□ 0
CHD3-206ENST00000452447 KIAA1211Q6ZU35 1233 aa15.07■□□□□ 0
CHD3-206ENST00000452447 ANKRD33Q7Z3H0 272 aa15.07■□□□□ 0
CHD3-206ENST00000452447 PDGFCQ9NRA1 345 aa15.07■□□□□ 0
CHD3-206ENST00000452447 GNEQ9Y223 722 aaKnown RBP15.07■□□□□ 0
CHD3-206ENST00000452447 B4DLN1 442 aa15.06■□□□□ 0
CHD3-206ENST00000452447 KIAA0355O15063 1070 aa15.06■□□□□ 0
CHD3-206ENST00000452447 DYNC1LI2O43237 492 aaPredicted RBP15.06■□□□□ 0
CHD3-206ENST00000452447 ZEB2O60315 1214 aa15.06■□□□□ 0
CHD3-206ENST00000452447 SMPD1P17405 629 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms