RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TSEN34Q9BSV6 310 aaKnown RBP14.66□□□□□ -0.06
CPSF4-208ENST00000452047 UBE2OQ9C0C9 1292 aaKnown RBP14.66□□□□□ -0.06
CPSF4-208ENST00000452047 CTNNA3Q9UI47 895 aa14.66□□□□□ -0.06
CPSF4-208ENST00000452047 MYADML2A6NDP7 307 aa14.65□□□□□ -0.06
CPSF4-208ENST00000452047 NFIBO00712 420 aa14.65□□□□□ -0.06
CPSF4-208ENST00000452047 CST5P28325 142 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-208ENST00000452047 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
CPSF4-208ENST00000452047 PNMA1Q8ND90 353 aa14.65□□□□□ -0.06
CPSF4-208ENST00000452047 LRCH3Q96II8 777 aa14.65□□□□□ -0.06
CPSF4-208ENST00000452047 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
CPSF4-208ENST00000452047 PDLIM7Q9NR12 457 aa14.65□□□□□ -0.06
CPSF4-208ENST00000452047 ZSWIM5Q9P217 1185 aa14.65□□□□□ -0.06
CPSF4-208ENST00000452047 DDX49Q9Y6V7 483 aaKnown RBP14.65□□□□□ -0.06
CPSF4-208ENST00000452047 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 ASB14A6NK59 587 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 CHMLP26374 656 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 ACLYP53396 1101 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 IRX5P78411 483 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-208ENST00000452047 LRIT3Q3SXY7 679 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 CCDC178Q5BJE1 867 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 GPATCH4Q5T3I0 446 aaKnown RBP14.64□□□□□ -0.07
CPSF4-208ENST00000452047 NSMFQ6X4W1 530 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 CLEC4DQ8WXI8 215 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 PURBQ96QR8 312 aaKnown RBP14.64□□□□□ -0.07
CPSF4-208ENST00000452047 ZSCAN10Q96SZ4 725 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-208ENST00000452047 MYH6P13533 1939 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 TNKSO95271 1327 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 WDR19Q8NEZ3 1342 aa14.64□□□□□ -0.07
CPSF4-208ENST00000452047 CDH23Q9H251 3354 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-208ENST00000452047 CTAGE5O15320 804 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 GOLGA8HP0CJ92 632 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 GJA9P57773 515 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 NKX3-2P78367 333 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 TLE2Q04725 743 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 KCNA10Q16322 511 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 SH3RF1Q7Z6J0 888 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 MORC4Q8TE76 937 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 LBHD1Q9BQE6 289 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-208ENST00000452047 KRT23Q9C075 422 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 CNNM2Q9H8M5 875 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 PRKAG2Q9UGJ0 569 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 PNMA2Q9UL42 364 aa14.63□□□□□ -0.07
CPSF4-208ENST00000452047 TRIM43BA6NCK2 446 aa14.62□□□□□ -0.07
CPSF4-208ENST00000452047 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-208ENST00000452047 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-208ENST00000452047 SLC30A10Q6XR72 485 aa14.62□□□□□ -0.07
CPSF4-208ENST00000452047 RUFY2Q8WXA3 655 aa14.62□□□□□ -0.07
CPSF4-208ENST00000452047 TRIM43Q96BQ3 446 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-208ENST00000452047 CPVLQ9H3G5 476 aa14.62□□□□□ -0.07
CPSF4-208ENST00000452047 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
CPSF4-208ENST00000452047 PRDM5Q9NQX1 630 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-208ENST00000452047 GNEQ9Y223 722 aaKnown RBP14.62□□□□□ -0.07
CPSF4-208ENST00000452047 SGSM2O43147 1006 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 ASGR1P07306 291 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 CYP21A2P08686 494 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 ALDH5A1P51649 535 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-208ENST00000452047 TNFAIP2Q03169 654 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 PTH1RQ03431 593 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 ASPRV1Q53RT3 343 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 TAPT1Q6NXT6 567 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 ANKRD33Q7Z3H0 272 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-208ENST00000452047 PCSK9Q8NBP7 692 aaKnown RBP14.61□□□□□ -0.07
CPSF4-208ENST00000452047 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 UBAC1Q9BSL1 405 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 SPC25Q9HBM1 224 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 STARD7Q9NQZ5 370 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 PDGFCQ9NRA1 345 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 ELP1O95163 1332 aa14.61□□□□□ -0.07
CPSF4-208ENST00000452047 EYSQ5T1H1 3165 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 PTPDC1A2A3K4 754 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 PQBP1O60828 265 aaKnown RBP14.6□□□□□ -0.07
CPSF4-208ENST00000452047 CLTBP09497 229 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 PTGS1P23219 599 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 ITGB8P26012 769 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
CPSF4-208ENST00000452047 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
CPSF4-208ENST00000452047 SEC23AQ15436 765 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 GNASQ5JWF2 1037 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 GPR153Q6NV75 609 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 TLK2Q86UE8 772 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 BADQ92934 168 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 GLT1D1Q96MS3 346 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 TOX2Q96NM4 488 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 VTA1Q9NP79 307 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 ADD3Q9UEY8 706 aaKnown RBP14.6□□□□□ -0.07
CPSF4-208ENST00000452047 TAF6LQ9Y6J9 622 aa14.6□□□□□ -0.07
CPSF4-208ENST00000452047 KIAA0355O15063 1070 aa14.59□□□□□ -0.07
CPSF4-208ENST00000452047 SMPD1P17405 629 aa14.59□□□□□ -0.07
CPSF4-208ENST00000452047 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
CPSF4-208ENST00000452047 CDC37Q16543 378 aaPredicted RBP14.59□□□□□ -0.07
CPSF4-208ENST00000452047 USH1GQ495M9 461 aa14.59□□□□□ -0.07
CPSF4-208ENST00000452047 TMEM63BQ5T3F8 832 aa14.59□□□□□ -0.07
CPSF4-208ENST00000452047 IFIT1BQ5T764 474 aaKnown RBP14.59□□□□□ -0.07
CPSF4-208ENST00000452047 RNF207Q6ZRF8 634 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms