RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
SMPD4-212ENST00000451542 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
SMPD4-212ENST00000451542 MAD2L2Q9UI95 211 aa13.99□□□□□ -0.17
SMPD4-212ENST00000451542 MRPL11Q9Y3B7 192 aaKnown RBP13.99□□□□□ -0.17
SMPD4-212ENST00000451542 SNX14Q9Y5W7 946 aa13.99□□□□□ -0.17
SMPD4-212ENST00000451542 SYNGAP1Q96PV0 1343 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 LOC102724159A0A0B4J2E5 919 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 PTPDC1A2A3K4 754 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 ZBTB5O15062 677 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 EN2P19622 333 aaPredicted RBP13.98□□□□□ -0.17
SMPD4-212ENST00000451542 TRIM32Q13049 653 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 PPP2R5BQ15173 497 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 PWP2Q15269 919 aaKnown RBP13.98□□□□□ -0.17
SMPD4-212ENST00000451542 QRICH1Q2TAL8 776 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 USH1GQ495M9 461 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 RNF207Q6ZRF8 634 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 STAG2Q8N3U4 1231 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 ANKLE1Q8NAG6 615 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 USP26Q9BXU7 913 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
SMPD4-212ENST00000451542 FLRT1Q9NZU1 646 aa13.98□□□□□ -0.17
SMPD4-212ENST00000451542 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
SMPD4-212ENST00000451542 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 RCAN1P53805 252 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 EXOSC10Q01780 885 aaKnown RBP13.97□□□□□ -0.17
SMPD4-212ENST00000451542 ADCK5Q3MIX3 580 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 MUM1L1Q5H9M0 696 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 MAMDC4Q6UXC1 1216 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
SMPD4-212ENST00000451542 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 CPVLQ9H3G5 476 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 ABHD16BQ9H3Z7 469 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 RIOX1Q9H6W3 641 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 SENP2Q9HC62 589 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 DDX20Q9UHI6 824 aaKnown RBP13.97□□□□□ -0.17
SMPD4-212ENST00000451542 NAP1L2Q9ULW6 460 aaPredicted RBP13.97□□□□□ -0.17
SMPD4-212ENST00000451542 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
SMPD4-212ENST00000451542 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 SEPT4O43236 478 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 ZBTB43O43298 467 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 FARP2O94887 1054 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-212ENST00000451542 CYBAP13498 195 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
SMPD4-212ENST00000451542 CALML3P27482 149 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 CCND3P30281 292 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-212ENST00000451542 BAATQ14032 418 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-212ENST00000451542 MICU3Q86XE3 530 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 SAMD3Q8N6K7 520 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 FAM133AQ8N9E0 248 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 FANCBQ8NB91 859 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 ARRDC4Q8NCT1 418 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 TM6SF1Q9BZW5 370 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 CRISPLD2Q9H0B8 497 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 GPHNQ9NQX3 736 aaPredicted RBP13.96□□□□□ -0.17
SMPD4-212ENST00000451542 MAP3K20Q9NYL2 800 aaKnown RBP13.96□□□□□ -0.17
SMPD4-212ENST00000451542 PCDHA1Q9Y5I3 950 aa13.96□□□□□ -0.17
SMPD4-212ENST00000451542 NFIBO00712 420 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 AKR1A1P14550 325 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 RPS6KB1P23443 525 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 ANAPC15P60006 121 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 Q6ZUG5 572 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 DNERQ8NFT8 737 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 MTMR8Q96EF0 704 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 TCEANC2Q96MN5 208 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 MYL10Q9BUA6 226 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 HTATIP2Q9BUP3 242 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-212ENST00000451542 OGDHLQ9ULD0 1010 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 FAM184BQ9ULE4 1060 aa13.95□□□□□ -0.18
SMPD4-212ENST00000451542 BAZ2BQ9UIF8 2168 aaKnown RBP13.95□□□□□ -0.18
SMPD4-212ENST00000451542 KLF18A0A0U1RQI7 1052 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 SMCHD1A6NHR9 2005 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 IGHA2P01877 340 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 RARBP10826 455 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
SMPD4-212ENST00000451542 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 RTN1Q16799 776 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 RUFY3Q7L099 469 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 ARMCX2Q7L311 632 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 CLEC4DQ8WXI8 215 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 PIGSQ96S52 555 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 SPC25Q9HBM1 224 aa13.94□□□□□ -0.18
SMPD4-212ENST00000451542 ZHX1Q9UKY1 873 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-212ENST00000451542 GOLGA8AA7E2F4 631 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 RXRAP19793 462 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 ACVR2BQ13705 512 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 PRAMEF19Q5SWL8 479 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 BRF1Q92994 677 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 SHISA4Q96DD7 197 aa13.93□□□□□ -0.18
SMPD4-212ENST00000451542 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms