RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 B4E1Z4 1266 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 MAGEA10P43363 369 aaPredicted RBP18.77■□□□□ 0.6
SGCE-208ENST00000450385 GJA9P57773 515 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 ANO1Q5XXA6 986 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 TOX2Q96NM4 488 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 UPF3AQ9H1J1 476 aaKnown RBP18.77■□□□□ 0.6
SGCE-208ENST00000450385 GPCPD1Q9NPB8 672 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 ZHX1Q9UKY1 873 aaPredicted RBP18.77■□□□□ 0.6
SGCE-208ENST00000450385 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
SGCE-208ENST00000450385 ELP1O95163 1332 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 PGK1P00558 417 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 SLC16A2P36021 539 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 ATN1P54259 1190 aaPredicted RBP18.76■□□□□ 0.59
SGCE-208ENST00000450385 CNTN2Q02246 1040 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 LRIT3Q3SXY7 679 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
SGCE-208ENST00000450385 DNERQ8NFT8 737 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 KATNBL1Q9H079 304 aa18.76■□□□□ 0.59
SGCE-208ENST00000450385 MROH7Q68CQ1 1323 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 SYNRGQ9UMZ2 1314 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 MYH6P13533 1939 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 SOWAHBA6NEL2 793 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 SGSM2O43147 1006 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 SYN1P17600 705 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 ACLYP53396 1101 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 TRAF1Q13077 416 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 MUM1L1Q5H9M0 696 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 CCSAPQ6IQ19 270 aaPredicted RBP18.75■□□□□ 0.59
SGCE-208ENST00000450385 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 TDHQ8IZJ6 230 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 MTA3Q9BTC8 594 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 UBE2OQ9C0C9 1292 aaKnown RBP18.75■□□□□ 0.59
SGCE-208ENST00000450385 VTA1Q9NP79 307 aa18.75■□□□□ 0.59
SGCE-208ENST00000450385 TNKSO95271 1327 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 A0A1W2PQ45 241 aaPredicted RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 A0A1W2PQY0 241 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 CABYRO75952 493 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 PARP1P09874 1014 aaKnown RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 IRX6P78412 446 aaPredicted RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 SART3Q15020 963 aaKnown RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 IFIT1BQ5T764 474 aaKnown RBP18.74■□□□□ 0.59
SGCE-208ENST00000450385 NSMFQ6X4W1 530 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 ANKRD33Q7Z3H0 272 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 SAMD3Q8N6K7 520 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 GLT1D1Q96MS3 346 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 ATP11BQ9Y2G3 1177 aa18.74■□□□□ 0.59
SGCE-208ENST00000450385 ERICH2A1L162 156 aa18.73■□□□□ 0.59
SGCE-208ENST00000450385 ZEB2O60315 1214 aa18.73■□□□□ 0.59
SGCE-208ENST00000450385 BAATQ14032 418 aaPredicted RBP18.73■□□□□ 0.59
SGCE-208ENST00000450385 KCNA10Q16322 511 aa18.73■□□□□ 0.59
SGCE-208ENST00000450385 CENPQQ7L2Z9 268 aaPredicted RBP18.73■□□□□ 0.59
SGCE-208ENST00000450385 CHMP4CQ96CF2 233 aa18.73■□□□□ 0.59
SGCE-208ENST00000450385 DCDC2CA8MYV0 355 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 C6orf222P0C671 652 aaPredicted RBP18.72■□□□□ 0.59
SGCE-208ENST00000450385 SNAP25P60880 206 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 SEC23AQ15436 765 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 GNASQ5JWF2 1037 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 RNF207Q6ZRF8 634 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 RASGRP2Q7LDG7 609 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 MCF2L2Q86YR7 1114 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 NCOA7Q8NI08 942 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 FERMT2Q96AC1 680 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 STARD7Q9NQZ5 370 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 MAP3K20Q9NYL2 800 aaKnown RBP18.72■□□□□ 0.59
SGCE-208ENST00000450385 GNEQ9Y223 722 aaKnown RBP18.72■□□□□ 0.59
SGCE-208ENST00000450385 ABCB11O95342 1321 aa18.72■□□□□ 0.59
SGCE-208ENST00000450385 CYP21A2P08686 494 aa18.71■□□□□ 0.59
SGCE-208ENST00000450385 ALDH5A1P51649 535 aaPredicted RBP18.71■□□□□ 0.59
SGCE-208ENST00000450385 TRIM60Q495X7 471 aa18.71■□□□□ 0.59
SGCE-208ENST00000450385 RALYLQ86SE5 291 aaKnown RBP18.71■□□□□ 0.59
SGCE-208ENST00000450385 ADGRF4Q8IZF3 695 aa18.71■□□□□ 0.59
SGCE-208ENST00000450385 AP5M1Q9H0R1 490 aa18.71■□□□□ 0.59
SGCE-208ENST00000450385 IL25Q9H293 177 aa18.71■□□□□ 0.59
SGCE-208ENST00000450385 MRPL11Q9Y3B7 192 aaKnown RBP18.71■□□□□ 0.59
SGCE-208ENST00000450385 LCTP09848 1927 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
SGCE-208ENST00000450385 PTPDC1A2A3K4 754 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 NFIBO00712 420 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 KIAA0355O15063 1070 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 NKRFO15226 690 aaKnown RBP eCLIP18.7■□□□□ 0.58
SGCE-208ENST00000450385 ASGR1P07306 291 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 TLE2Q04725 743 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 TAPT1Q6NXT6 567 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 TMTC2Q8N394 836 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 MAP3K14Q99558 947 aa18.7■□□□□ 0.58
SGCE-208ENST00000450385 LAMA2P24043 3122 aaKnown RBP18.69■□□□□ 0.58
SGCE-208ENST00000450385 CLTBP09497 229 aa18.69■□□□□ 0.58
SGCE-208ENST00000450385 CDK7P50613 346 aa18.69■□□□□ 0.58
SGCE-208ENST00000450385 RPS6P62753 249 aaKnown RBP18.69■□□□□ 0.58
SGCE-208ENST00000450385 PTH1RQ03431 593 aa18.69■□□□□ 0.58
SGCE-208ENST00000450385 DUSP28Q4G0W2 176 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms