RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GNAT2P19087 354 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 RABGGTBP53611 331 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 GPATCH3Q96I76 525 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 TRERF1Q96PN7 1200 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 UHRF1Q96T88 793 aaPredicted RBP21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 KATNBL1Q9H079 304 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 TRPV6Q9H1D0 765 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 A1CFQ9NQ94 594 aaKnown RBP21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 RAPGEFL1Q9UHV5 662 aa21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 YBX2Q9Y2T7 364 aaKnown RBP21.44■■□□□ 1.02
CHCHD3-203ENST00000448878 SOWAHBA6NEL2 793 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 PTGS1P23219 599 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 SLC1A4P43007 532 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 TFAP4Q01664 338 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 PDE4BQ07343 736 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 RPUSD2Q8IZ73 545 aaKnown RBP21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 EPB41L4AQ9HCS5 686 aaPredicted RBP21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 MTMR7Q9Y216 660 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 SLC4A7Q9Y6M7 1214 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 DDX49Q9Y6V7 483 aaKnown RBP21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 ASTN1O14525 1302 aa21.43■■□□□ 1.02
CHCHD3-203ENST00000448878 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 M0R2C6 588 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 SLC3A2P08195 630 aaKnown RBP21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 SMPD1P17405 629 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 MCCP23508 829 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 SNAP25P60880 206 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 PSMC6P62333 389 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 SKIV2LQ15477 1246 aaKnown RBP21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 TSHZ3Q63HK5 1081 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 PPP2R2DQ66LE6 453 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 FAM160B2Q86V87 743 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 IFNL3Q8IZI9 196 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 NACAP1Q9BZK3 213 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 PDGFCQ9NRA1 345 aa21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 GNEQ9Y223 722 aaKnown RBP21.42■■□□□ 1.02
CHCHD3-203ENST00000448878 B4GALT4O60513 344 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 ZFYP08048 801 aaPredicted RBP21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 KIAA1211Q6ZU35 1233 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 FBXO16Q8IX29 292 aaPredicted RBP21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 SLC43A3Q8NBI5 491 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 NEDD1Q8NHV4 660 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 STAG1Q8WVM7 1258 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 SCLYQ96I15 445 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 SYNPO2Q9UMS6 1093 aa21.41■■□□□ 1.02
CHCHD3-203ENST00000448878 MYOGP15173 224 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 NKX3-2P78367 333 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 TKFCQ3LXA3 575 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 IQSEC1Q6DN90 963 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 NSMFQ6X4W1 530 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 KCTD1Q719H9 257 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 NOC4LQ9BVI4 516 aaKnown RBP21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 NAPBQ9H115 298 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 STX8Q9UNK0 236 aa21.4■■□□□ 1.02
CHCHD3-203ENST00000448878 ZNF536O15090 1300 aa21.39■■□□□ 1.01
CHCHD3-203ENST00000448878 GRIN2DO15399 1336 aa21.39■■□□□ 1.01
CHCHD3-203ENST00000448878 LRRFIP1Q32MZ4 808 aaKnown RBP21.39■■□□□ 1.01
CHCHD3-203ENST00000448878 WNT8AQ9H1J5 351 aa21.39■■□□□ 1.01
CHCHD3-203ENST00000448878 GBF1Q92538 1859 aa21.39■■□□□ 1.01
CHCHD3-203ENST00000448878 MUM1L1Q5H9M0 696 aa21.38■■□□□ 1.01
CHCHD3-203ENST00000448878 TMEM63BQ5T3F8 832 aa21.38■■□□□ 1.01
CHCHD3-203ENST00000448878 DEFB128Q7Z7B8 93 aa21.38■■□□□ 1.01
CHCHD3-203ENST00000448878 MIER1Q8N108 512 aa21.38■■□□□ 1.01
CHCHD3-203ENST00000448878 GMCL1Q96IK5 515 aa21.38■■□□□ 1.01
CHCHD3-203ENST00000448878 SEZ6LQ9BYH1 1024 aa21.38■■□□□ 1.01
CHCHD3-203ENST00000448878 TSPY2A6NKD2 308 aa21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 ATP2A2P16615 1042 aaKnown RBP21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 PPARAQ07869 468 aa21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 TAPT1Q6NXT6 567 aa21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 PURBQ96QR8 312 aaKnown RBP21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 SEC62Q99442 399 aaKnown RBP21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 CYP39A1Q9NYL5 469 aa21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 CCPG1Q9ULG6 757 aa21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 PCDHA11Q9Y5I1 949 aa21.37■■□□□ 1.01
CHCHD3-203ENST00000448878 MYO9BQ13459 2157 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 MYL3P08590 195 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 CYP2C9P11712 490 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 RCSD1Q6JBY9 416 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 NECAB3Q96P71 396 aaPredicted RBP21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 CERS4Q9HA82 394 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 GPHNQ9NQX3 736 aaPredicted RBP21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 PRR12Q9ULL5 1215 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 Q9Y3F1 56 aa21.36■■□□□ 1.01
CHCHD3-203ENST00000448878 SUPT20HL2P0C7V6 817 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 TFF2Q03403 129 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 CCDC96Q2M329 555 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 FAM47CQ5HY64 1035 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 TMEM67Q5HYA8 995 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 ALDH8A1Q9H2A2 487 aaPredicted RBP21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 VTA1Q9NP79 307 aa21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 TRMT13Q9NUP7 481 aaKnown RBP21.35■■□□□ 1.01
CHCHD3-203ENST00000448878 RFXAPO00287 272 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 GTPBP6O43824 516 aaPredicted RBP21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 TTLL4Q14679 1199 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 AAK1Q2M2I8 961 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 FSD1Q9BTV5 496 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 WDR11Q9BZH6 1224 aa21.34■■□□□ 1.01
CHCHD3-203ENST00000448878 POLR3EQ9NVU0 708 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms