RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 FBXO11Q86XK2 927 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 CLEC4DQ8WXI8 215 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 MAML3Q96JK9 1138 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 A1CFQ9NQ94 594 aaKnown RBP15.54■□□□□ 0.08
SNHG4-201ENST00000448190 SLC5A4Q9NY91 659 aa15.54■□□□□ 0.08
SNHG4-201ENST00000448190 RLFQ13129 1914 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 LAMA4Q16363 1823 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 PTPDC1A2A3K4 754 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 POTEB2H3BUK9 544 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 ZBTB43O43298 467 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 CALM1P0DP23 149 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 CALM2P0DP24 149 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 CALM3P0DP25 149 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 CNGA1P29973 690 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 CCND3P30281 292 aaPredicted RBP15.53■□□□□ 0.08
SNHG4-201ENST00000448190 TRMT44Q8IYL2 757 aaKnown RBP15.53■□□□□ 0.08
SNHG4-201ENST00000448190 DEFB118Q96PH6 123 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 RIOX1Q9H6W3 641 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 PDRG1Q9NUG6 133 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
SNHG4-201ENST00000448190 DNAJC25-GNG10A0A024R161 153 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 SOWAHBA6NEL2 793 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 GOLGA8AA7E2F4 631 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 GOLGA8BA8MQT2 603 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 ZBTB5O15062 677 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 PPFIA3O75145 1194 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 CALML3P27482 149 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 ADD1P35611 737 aaKnown RBP15.52■□□□□ 0.08
SNHG4-201ENST00000448190 TRPV1Q8NER1 839 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 MTMR8Q96EF0 704 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 MAP3K14Q99558 947 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 HMX1Q9NP08 348 aaPredicted RBP15.52■□□□□ 0.08
SNHG4-201ENST00000448190 CYP39A1Q9NYL5 469 aa15.52■□□□□ 0.08
SNHG4-201ENST00000448190 RPTORQ8N122 1335 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 PNMA6FA0A0J9YX94 578 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 CDC27P30260 824 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 GNAQP50148 359 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 TOB2Q14106 344 aaPredicted RBP15.51■□□□□ 0.07
SNHG4-201ENST00000448190 RTN1Q16799 776 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 OLFML2BQ68BL8 750 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 AMNQ9BXJ7 453 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 TM6SF1Q9BZW5 370 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
SNHG4-201ENST00000448190 PCDHA1Q9Y5I3 950 aa15.51■□□□□ 0.07
SNHG4-201ENST00000448190 BRCA2P51587 3418 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 TFRCP02786 760 aaKnown RBP15.5■□□□□ 0.07
SNHG4-201ENST00000448190 CCT2P78371 535 aaKnown RBP15.5■□□□□ 0.07
SNHG4-201ENST00000448190 MAP3K21Q5TCX8 1036 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 ANO1Q5XXA6 986 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 SLC30A10Q6XR72 485 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 RNF207Q6ZRF8 634 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 TMTC3Q6ZXV5 915 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 RRP36Q96EU6 259 aaKnown RBP15.5■□□□□ 0.07
SNHG4-201ENST00000448190 FGD4Q96M96 766 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
SNHG4-201ENST00000448190 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.5■□□□□ 0.072e-8■■□□□ 12.4
SNHG4-201ENST00000448190 DIS3Q9Y2L1 958 aaKnown RBP15.5■□□□□ 0.07
SNHG4-201ENST00000448190 MRPL11Q9Y3B7 192 aaKnown RBP15.5■□□□□ 0.07
SNHG4-201ENST00000448190 ABCB11O95342 1321 aa15.49■□□□□ 0.07
SNHG4-201ENST00000448190 EIF5BO60841 1220 aaKnown RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 SNAI1O95863 264 aaPredicted RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 IGHA2P01877 340 aa15.49■□□□□ 0.07
SNHG4-201ENST00000448190 GJB1P08034 283 aa15.49■□□□□ 0.07
SNHG4-201ENST00000448190 PDIA3P30101 505 aaKnown RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 METAP2P50579 478 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 RPS6P62753 249 aaKnown RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 STK3Q13188 491 aa15.49■□□□□ 0.07
SNHG4-201ENST00000448190 NOL8Q76FK4 1167 aaKnown RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 SPZ1Q9BXG8 430 aa15.49■□□□□ 0.07
SNHG4-201ENST00000448190 NCOA5Q9HCD5 579 aaKnown RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 PNMA2Q9UL42 364 aa15.49■□□□□ 0.07
SNHG4-201ENST00000448190 V9GY48 417 aaPredicted RBP15.49■□□□□ 0.07
SNHG4-201ENST00000448190 PFASO15067 1338 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 DTNBO60941 627 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 SGPL1O95470 568 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 CFBP00751 764 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 ANAPC15P60006 121 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 U2AF1L4Q8WU68 220 aaKnown RBP15.48■□□□□ 0.07
SNHG4-201ENST00000448190 TAAR1Q96RJ0 339 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 AGXT2Q9BYV1 514 aa15.48■□□□□ 0.07
SNHG4-201ENST00000448190 PAK6Q9NQU5 681 aaPredicted RBP15.48■□□□□ 0.07
SNHG4-201ENST00000448190 ASTN1O14525 1302 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 A0A0G2JMZ2 1700 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 OPLAHO14841 1288 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 SMARCA1P28370 1054 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 HOXA13P31271 388 aaPredicted RBP15.47■□□□□ 0.07
SNHG4-201ENST00000448190 NEK4P51957 841 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 EEPD1Q7L9B9 569 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 FBXL16Q8N461 479 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 C22orf23Q9BZE7 217 aa15.47■□□□□ 0.07
SNHG4-201ENST00000448190 RBM28Q9NW13 759 aaKnown RBP15.47■□□□□ 0.07
SNHG4-201ENST00000448190 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.47■□□□□ 0.07
SNHG4-201ENST00000448190 SEC63Q9UGP8 760 aaKnown RBP15.47■□□□□ 0.07
SNHG4-201ENST00000448190 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
SNHG4-201ENST00000448190 ZNF865P0CJ78 1059 aaPredicted RBP15.46■□□□□ 0.07
SNHG4-201ENST00000448190 CYBAP13498 195 aa15.46■□□□□ 0.07
SNHG4-201ENST00000448190 GJA8P48165 433 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms