RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TRMT44Q8IYL2 757 aaKnown RBP13.86□□□□□ -0.19
RFC4-208ENST00000447345 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
RFC4-208ENST00000447345 TMTC2Q8N394 836 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 BRF1Q92994 677 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 PIGSQ96S52 555 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.86□□□□□ -0.19
RFC4-208ENST00000447345 PTPDC1A2A3K4 754 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 CYTH3O43739 400 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 CALM1P0DP23 149 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 CALM2P0DP24 149 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 CALM3P0DP25 149 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 CCND3P30281 292 aaPredicted RBP13.85□□□□□ -0.19
RFC4-208ENST00000447345 CNTN2Q02246 1040 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 APOBRQ0VD83 1088 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 ZNF792Q3KQV3 632 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 SLC30A10Q6XR72 485 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 SYNE3Q6ZMZ3 975 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 SGMS1Q86VZ5 419 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 FBXO11Q86XK2 927 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 DEFB118Q96PH6 123 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 HMX1Q9NP08 348 aaPredicted RBP13.85□□□□□ -0.19
RFC4-208ENST00000447345 PFASO15067 1338 aa13.85□□□□□ -0.19
RFC4-208ENST00000447345 DNAJC25-GNG10A0A024R161 153 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 GOLGA8AA7E2F4 631 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 POTEB2H3BUK9 544 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 ZBTB43O43298 467 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 PPP1R11O60927 126 aaPredicted RBP13.84□□□□□ -0.19
RFC4-208ENST00000447345 EN2P19622 333 aaPredicted RBP13.84□□□□□ -0.19
RFC4-208ENST00000447345 CNGA1P29973 690 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 MAP3K21Q5TCX8 1036 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 OLFML2BQ68BL8 750 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 RUFY3Q7L099 469 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 CCDC82Q8N4S0 544 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 CLEC4DQ8WXI8 215 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 PURBQ96QR8 312 aaKnown RBP13.84□□□□□ -0.19
RFC4-208ENST00000447345 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 CYP46A1Q9Y6A2 500 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 ABCB11O95342 1321 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 RPTORQ8N122 1335 aa13.84□□□□□ -0.19
RFC4-208ENST00000447345 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 ZBTB5O15062 677 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 CALML3P27482 149 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 BAATQ14032 418 aaPredicted RBP13.83□□□□□ -0.2
RFC4-208ENST00000447345 RTN1Q16799 776 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 PRAMEF19Q5SWL8 479 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.83□□□□□ -0.2
RFC4-208ENST00000447345 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.2
RFC4-208ENST00000447345 FANCBQ8NB91 859 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 TRPV1Q8NER1 839 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 SHISA4Q96DD7 197 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 FGD4Q96M96 766 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 RIOX1Q9H6W3 641 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 ZSWIM6Q9HCJ5 1215 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 PAK6Q9NQU5 681 aaPredicted RBP13.83□□□□□ -0.2
RFC4-208ENST00000447345 PNMA2Q9UL42 364 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 DDX49Q9Y6V7 483 aaKnown RBP13.83□□□□□ -0.2
RFC4-208ENST00000447345 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
RFC4-208ENST00000447345 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 GJB1P08034 283 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 CYBAP13498 195 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 ANO1Q5XXA6 986 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
RFC4-208ENST00000447345 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
RFC4-208ENST00000447345 LARP6Q9BRS8 491 aaKnown RBP13.82□□□□□ -0.2
RFC4-208ENST00000447345 TINF2Q9BSI4 451 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
RFC4-208ENST00000447345 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
RFC4-208ENST00000447345 ASTN1O14525 1302 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
RFC4-208ENST00000447345 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 EIF5BO60841 1220 aaKnown RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 GJA8P48165 433 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 GNAQP50148 359 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.2
RFC4-208ENST00000447345 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 TOB2Q14106 344 aaPredicted RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 ARMCX2Q7L311 632 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 LZTS2Q9BRK4 669 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 TM6SF1Q9BZW5 370 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 MRPL11Q9Y3B7 192 aaKnown RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 TNRC18O15417 2968 aaPredicted RBP13.81□□□□□ -0.2
RFC4-208ENST00000447345 CNTNAP5Q8WYK1 1306 aa13.81□□□□□ -0.2
RFC4-208ENST00000447345 SGPL1O95470 568 aa13.8□□□□□ -0.2
RFC4-208ENST00000447345 CFBP00751 764 aa13.8□□□□□ -0.2
RFC4-208ENST00000447345 IGHA2P01877 340 aa13.8□□□□□ -0.2
RFC4-208ENST00000447345 TFRCP02786 760 aaKnown RBP13.8□□□□□ -0.2
RFC4-208ENST00000447345 CDC27P30260 824 aa13.8□□□□□ -0.2
RFC4-208ENST00000447345 ANAPC15P60006 121 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms