RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 LRRC10BA6NIK2 292 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 GYPCP04921 128 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
GNE-203ENST00000447283 LMNB1P20700 586 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
GNE-203ENST00000447283 GPS2Q13227 327 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 LIMA1Q9UHB6 759 aaKnown RBP12.89□□□□□ -0.35
GNE-203ENST00000447283 FLT1P17948 1338 aa12.89□□□□□ -0.35
GNE-203ENST00000447283 CASP14P31944 242 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 MUM1L1Q5H9M0 696 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
GNE-203ENST00000447283 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
GNE-203ENST00000447283 PCDHAC2Q9Y5I4 1007 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 SMIM22K7EJ46 135 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 TULP2O00295 520 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 FGRP09769 529 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 CYP2D6P10635 497 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 CASP1P29466 404 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
GNE-203ENST00000447283 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
GNE-203ENST00000447283 PICALMQ13492 652 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 TMTC1Q8IUR5 882 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 ENAHQ8N8S7 591 aaPredicted RBP12.88□□□□□ -0.35
GNE-203ENST00000447283 CPLX3Q8WVH0 158 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
GNE-203ENST00000447283 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 PSD3Q9NYI0 1048 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 MYO1AQ9UBC5 1043 aa12.88□□□□□ -0.35
GNE-203ENST00000447283 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
GNE-203ENST00000447283 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 MMP14P50281 582 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 SPAG1Q07617 926 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 TRIM14Q14142 442 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 DLGAP5Q15398 846 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 NPY5RQ15761 445 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 E2F4Q16254 413 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 SMYD4Q8IYR2 804 aaPredicted RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 ATRIPQ8WXE1 791 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 EXOC4Q96A65 974 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 PRMT6Q96LA8 375 aaPredicted RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 PYM1Q9BRP8 204 aaKnown RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 WNT7AO00755 349 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 CALM1P0DP23 149 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 CALM2P0DP24 149 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 CALM3P0DP25 149 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.35
GNE-203ENST00000447283 KRT31Q15323 416 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 IQUBQ8NA54 791 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 RWDD2AQ9UIY3 292 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
GNE-203ENST00000447283 V9GY48 417 aaPredicted RBP12.87□□□□□ -0.35
GNE-203ENST00000447283 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 SOCS7O14512 581 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 PRDM1O75626 825 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 ERVK-24P63145 666 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 EVX2Q03828 476 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 TROAPQ12815 778 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 ABHD10Q9NUJ1 306 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 ZNF646O15015 1829 aaPredicted RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 H3BQF6 201 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 ERLIN1O75477 346 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 DDAH1O94760 285 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 PLEKHA8P1O95397 391 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 TRAPPC10P48553 1259 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 PTGDRQ13258 359 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 PSME4Q14997 1843 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 ZNF174Q15697 407 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 IFIT1BQ5T764 474 aaKnown RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 HDXQ7Z353 690 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 SLC35F6Q8N357 371 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 MTMR14Q8NCE2 650 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
GNE-203ENST00000447283 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
GNE-203ENST00000447283 N4BP3O15049 544 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 ORC4O43929 436 aa12.85□□□□□ -0.35
GNE-203ENST00000447283 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms