RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ARHGAP27Q6ZUM4 889 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 MCM10Q7L590 875 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 NPM2Q86SE8 214 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 PDZD3Q86UT5 571 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 HRASLS5Q96KN8 279 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 NIF3L1Q9GZT8 377 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 NARFQ9UHQ1 456 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 PCOLCE2Q9UKZ9 415 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 PLAGL2Q9UPG8 496 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 USTQ9Y2C2 406 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 DLG5Q8TDM6 1919 aa10.13□□□□□ -0.79
SMARCE1-206ENST00000447024 DBX1A6NMT0 343 aa10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 GRIN3BO60391 1043 aa10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 TMPOP42166 694 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 EIF5P55010 431 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 TGFB2P61812 414 aa10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 TMEM40Q8WWA1 233 aa10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 GPN3Q9UHW5 284 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 COL15A1P39059 1388 aa10.12□□□□□ -0.79
SMARCE1-206ENST00000447024 C4AP0C0L4 1744 aa10.11□□□□□ -0.79
SMARCE1-206ENST00000447024 RIPK4P57078 832 aa10.11□□□□□ -0.79
SMARCE1-206ENST00000447024 DTHD1Q6ZMT9 781 aa10.11□□□□□ -0.79
SMARCE1-206ENST00000447024 EPS8L3Q8TE67 593 aaKnown RBP10.11□□□□□ -0.79
SMARCE1-206ENST00000447024 KRTAP4-9Q9BYQ8 210 aa10.11□□□□□ -0.79
SMARCE1-206ENST00000447024 ZBTB1Q9Y2K1 713 aa10.11□□□□□ -0.79
SMARCE1-206ENST00000447024 KIF13BQ9NQT8 1826 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 TMEM265A0A087WTH1 108 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 ANP32CO43423 234 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 TM4SF1P30408 202 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 LCE4AQ5TA78 99 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 CLEC4GQ6UXB4 293 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 KCNB2Q92953 911 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 ISL2Q96A47 359 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 TMEM39AQ9NV64 488 aa10.1□□□□□ -0.79
SMARCE1-206ENST00000447024 ITIH2P19823 946 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 FCGRTP55899 365 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 CALD1Q05682 793 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 PPP2R3AQ06190 1150 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 GPR162Q16538 588 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 ANGEL2Q5VTE6 544 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 SMIM5Q71RC9 77 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 CSRNP1Q96S65 589 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 CHD4Q14839 1912 aa10.09□□□□□ -0.79
SMARCE1-206ENST00000447024 C10orf71Q711Q0 1435 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 KCNQ3O43525 872 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 EIF4A1P60842 406 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 NLGN2Q8NFZ4 835 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 STK35Q8TDR2 534 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 CHMP4AQ9BY43 222 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 KDM3BQ7LBC6 1761 aa10.08□□□□□ -0.8
SMARCE1-206ENST00000447024 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 CHL1O00533 1208 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 A1BGP04217 495 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 PKN1Q16512 942 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 SPOCD1Q6ZMY3 1216 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 KSR1Q8IVT5 923 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 SULF2Q8IWU5 870 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 TNKS2Q9H2K2 1166 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 SSU72Q9NP77 194 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 TSPYL4Q9UJ04 414 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 ZNF652Q9Y2D9 606 aa10.07□□□□□ -0.8
SMARCE1-206ENST00000447024 HOXB7P09629 217 aa10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 YY1P25490 414 aa10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 NFIXQ14938 502 aa10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 ZC3H12AQ5D1E8 599 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 SLC23A3Q6PIS1 610 aa10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 NGEFQ8N5V2 710 aa10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 RNF214Q8ND24 703 aa10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 ALKBH8Q96BT7 664 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-206ENST00000447024 CARMIL3Q8ND23 1372 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 UTRNP46939 3433 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 ERVV-1B6SEH8 477 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 ERVK-24P63145 666 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 DDR1Q08345 913 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 DMRTB1Q96MA1 342 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 HEXIM2Q96MH2 286 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 PRDM7Q9NQW5 492 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 LAMB4A4D0S4 1761 aa10.05□□□□□ -0.8
SMARCE1-206ENST00000447024 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 SCN7AQ01118 1682 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 SERPINB2P05120 415 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 FBLN7Q53RD9 439 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 MAP1SQ66K74 1059 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 THUMPD2Q9BTF0 503 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 SNX11Q9Y5W9 270 aa10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-206ENST00000447024 ARNTP27540 789 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms