RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RXRAP19793 462 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 HSPA4P34932 840 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 LHX8Q68G74 356 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 NFXL1Q6ZNB6 911 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 FAM133AQ8N9E0 248 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 CYP39A1Q9NYL5 469 aa17.29■□□□□ 0.36
HDAC4-204ENST00000446876 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
HDAC4-204ENST00000446876 ASTN1O14525 1302 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 PFASO15067 1338 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 ALPK3Q96L96 1907 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 SOWAHBA6NEL2 793 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 SNAI1O95863 264 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-204ENST00000446876 BAATQ14032 418 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-204ENST00000446876 TSGA10IPQ3SY00 556 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 SLC30A10Q6XR72 485 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 UBE2Q1Q7Z7E8 422 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 KCNB2Q92953 911 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 OGDHLQ9ULD0 1010 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 SNX14Q9Y5W7 946 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 PDE4DIPQ5VU43 2346 aa17.28■□□□□ 0.36
HDAC4-204ENST00000446876 PTPDC1A2A3K4 754 aa17.27■□□□□ 0.36
HDAC4-204ENST00000446876 CCDC69A6NI79 296 aa17.27■□□□□ 0.36
HDAC4-204ENST00000446876 DDAH1O94760 285 aa17.27■□□□□ 0.36
HDAC4-204ENST00000446876 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-204ENST00000446876 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
HDAC4-204ENST00000446876 KRT32Q14532 448 aa17.27■□□□□ 0.36
HDAC4-204ENST00000446876 HOMER1Q86YM7 354 aa17.27■□□□□ 0.36
HDAC4-204ENST00000446876 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
HDAC4-204ENST00000446876 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.36
HDAC4-204ENST00000446876 JAKMIP1Q96N16 626 aaKnown RBP17.27■□□□□ 0.36
HDAC4-204ENST00000446876 SYNGAP1Q96PV0 1343 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 SEPT4O43236 478 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 CYTH3O43739 400 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 PPP1R11O60927 126 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 ZNF865P0CJ78 1059 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 CALML3P27482 149 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 LIFRP42702 1097 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 MAMDC4Q6UXC1 1216 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 ZNF467Q7Z7K2 595 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 PAWRQ96IZ0 340 aaKnown RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 PIGSQ96S52 555 aa17.26■□□□□ 0.35
HDAC4-204ENST00000446876 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 ZHX1Q9UKY1 873 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-204ENST00000446876 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 FBXO11Q86XK2 927 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 CTCFLQ8NI51 663 aaPredicted RBP17.25■□□□□ 0.35
HDAC4-204ENST00000446876 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 RIOX1Q9H6W3 641 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 PNMA2Q9UL42 364 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 CNPY2Q9Y2B0 182 aa17.25■□□□□ 0.35
HDAC4-204ENST00000446876 ABCB11O95342 1321 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 ZBTB5O15062 677 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 RPS6P62753 249 aaKnown RBP17.24■□□□□ 0.35
HDAC4-204ENST00000446876 RNF207Q6ZRF8 634 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 MICU3Q86XE3 530 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
HDAC4-204ENST00000446876 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 MSL3Q8N5Y2 521 aaKnown RBP17.24■□□□□ 0.35
HDAC4-204ENST00000446876 ANKLE1Q8NAG6 615 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 USP26Q9BXU7 913 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 NRBP1Q9UHY1 535 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 BRPF3Q9ULD4 1205 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 SLC12A7Q9Y666 1083 aa17.24■□□□□ 0.35
HDAC4-204ENST00000446876 MSCO60682 206 aa17.23■□□□□ 0.35
HDAC4-204ENST00000446876 SGMS1Q86VZ5 419 aa17.23■□□□□ 0.35
HDAC4-204ENST00000446876 MAP3K14Q99558 947 aa17.23■□□□□ 0.35
HDAC4-204ENST00000446876 AMNQ9BXJ7 453 aa17.23■□□□□ 0.35
HDAC4-204ENST00000446876 KATNBL1Q9H079 304 aa17.23■□□□□ 0.35
HDAC4-204ENST00000446876 ADCY6O43306 1168 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-204ENST00000446876 KIF5BP33176 963 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 ALDH5A1P51649 535 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-204ENST00000446876 ACVR2BQ13705 512 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 GJC2Q5T442 439 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-204ENST00000446876 APOA5Q6Q788 366 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 EEPD1Q7L9B9 569 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 NECAB2Q7Z6G3 386 aa17.22■□□□□ 0.35
HDAC4-204ENST00000446876 SRBD1Q8N5C6 995 aaKnown RBP17.22■□□□□ 0.35
HDAC4-204ENST00000446876 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 ASB14A6NK59 587 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 OPLAHO14841 1288 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 HMGB1P09429 215 aaKnown RBP17.21■□□□□ 0.35
HDAC4-204ENST00000446876 CALM1P0DP23 149 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 CALM2P0DP24 149 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 CALM3P0DP25 149 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 AKR1A1P14550 325 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.35
HDAC4-204ENST00000446876 Q6ZUG5 572 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 FBXO16Q8IX29 292 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-204ENST00000446876 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 ABHD16BQ9H3Z7 469 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 C11orf49Q9H6J7 331 aa17.21■□□□□ 0.35
HDAC4-204ENST00000446876 COL20A1Q9P218 1284 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms