RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 KCNJ14Q9UNX9 436 aa20.04■□□□□ 0.8
SGCE-206ENST00000445866 SMCO2A6NFE2 343 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 TBC1D8O95759 1140 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 CCNA1P78396 465 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 TKFCQ3LXA3 575 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 TYW1BQ6NUM6 668 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 C17orf99Q6UX52 265 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 FBXO18Q8NFZ0 1043 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 R3HDMLQ9H3Y0 253 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 PSTPIP2Q9H939 334 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 MORF4L1Q9UBU8 362 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 ABCB11O95342 1321 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 PHIPQ8WWQ0 1821 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 SLC25A27O95847 323 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 SYT1P21579 422 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 KRT40Q6A162 431 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 CCDC148Q8NFR7 591 aa20.03■□□□□ 0.8
SGCE-206ENST00000445866 MRPL12P52815 198 aaKnown RBP20.02■□□□□ 0.8
SGCE-206ENST00000445866 MAP2K1Q02750 393 aaPredicted RBP20.02■□□□□ 0.8
SGCE-206ENST00000445866 SHISA4Q96DD7 197 aa20.02■□□□□ 0.8
SGCE-206ENST00000445866 C6orf50Q9HD87 102 aa20.02■□□□□ 0.8
SGCE-206ENST00000445866 RNF146Q9NTX7 359 aa20.02■□□□□ 0.8
SGCE-206ENST00000445866 BCRP11274 1271 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 ERCC3P19447 782 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 FAM110CQ1W6H9 321 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 MUM1L1Q5H9M0 696 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 WDR78Q5VTH9 848 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 PPP1R18Q6NYC8 613 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 CHST13Q8NET6 341 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 CLEC4DQ8WXI8 215 aa20.01■□□□□ 0.79
SGCE-206ENST00000445866 CALML3P27482 149 aa20■□□□□ 0.79
SGCE-206ENST00000445866 GNA11P29992 359 aa20■□□□□ 0.79
SGCE-206ENST00000445866 COPB2P35606 906 aa20■□□□□ 0.79
SGCE-206ENST00000445866 SAFBQ15424 915 aaKnown RBP eCLIP20■□□□□ 0.79
SGCE-206ENST00000445866 MCF2L2Q86YR7 1114 aa20■□□□□ 0.79
SGCE-206ENST00000445866 FAM177A1Q8N128 213 aaPredicted RBP20■□□□□ 0.79
SGCE-206ENST00000445866 TBC1D5Q92609 795 aa20■□□□□ 0.79
SGCE-206ENST00000445866 BEGAINQ9BUH8 593 aa20■□□□□ 0.79
SGCE-206ENST00000445866 PHF20Q9BVI0 1012 aa20■□□□□ 0.79
SGCE-206ENST00000445866 ZMYND12Q9H0C1 365 aa20■□□□□ 0.79
SGCE-206ENST00000445866 MYH4Q9Y623 1939 aa20■□□□□ 0.79
SGCE-206ENST00000445866 NFIBO00712 420 aa20■□□□□ 0.79
SGCE-206ENST00000445866 ADCY7P51828 1080 aa20■□□□□ 0.79
SGCE-206ENST00000445866 CUL5Q93034 780 aa20■□□□□ 0.79
SGCE-206ENST00000445866 GLT8D2Q9H1C3 349 aa20■□□□□ 0.79
SGCE-206ENST00000445866 PORCNQ9H237 461 aa20■□□□□ 0.79
SGCE-206ENST00000445866 MROH8Q9H579 483 aa20■□□□□ 0.79
SGCE-206ENST00000445866 ACAD9Q9H845 621 aa20■□□□□ 0.79
SGCE-206ENST00000445866 EFCC1Q9HA90 598 aa20■□□□□ 0.79
SGCE-206ENST00000445866 RIC8AQ9NPQ8 531 aa20■□□□□ 0.79
SGCE-206ENST00000445866 FBXO40Q9UH90 709 aa20■□□□□ 0.79
SGCE-206ENST00000445866 ADGRA2Q96PE1 1338 aa20■□□□□ 0.79
SGCE-206ENST00000445866 VPS37CA5D8V6 355 aaPredicted RBP19.99■□□□□ 0.79
SGCE-206ENST00000445866 GCOM1H8Y6P7 765 aaPredicted RBP19.99■□□□□ 0.79
SGCE-206ENST00000445866 STX6O43752 255 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 CFBP00751 764 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 POLR2MP0CAP2 368 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 MCTP1Q6DN14 999 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 GALNT17Q6IS24 598 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 NSMFQ6X4W1 530 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 SHCBP1Q8NEM2 672 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 BICD2Q8TD16 824 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 PCDHA4Q9UN74 947 aa19.99■□□□□ 0.79
SGCE-206ENST00000445866 ESYT2A0FGR8 921 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 OPLAHO14841 1288 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 ECM2O94769 699 aaPredicted RBP19.98■□□□□ 0.79
SGCE-206ENST00000445866 MMP1P03956 469 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 PDIA4P13667 645 aaKnown RBP19.98■□□□□ 0.79
SGCE-206ENST00000445866 USP17L6PQ6QN14 398 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 BLIDQ8IZY5 108 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 ANKRD35Q8N283 1001 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 RGS22Q8NE09 1264 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 BRMS1Q9HCU9 246 aa19.98■□□□□ 0.79
SGCE-206ENST00000445866 MAPK4P31152 587 aa19.97■□□□□ 0.79
SGCE-206ENST00000445866 HOXA13P31271 388 aaPredicted RBP19.97■□□□□ 0.79
SGCE-206ENST00000445866 CFHR5Q9BXR6 569 aa19.97■□□□□ 0.79
SGCE-206ENST00000445866 BIN2Q9UBW5 565 aaPredicted RBP19.97■□□□□ 0.79
SGCE-206ENST00000445866 BTBD18B2RXH4 712 aa19.97■□□□□ 0.79
SGCE-206ENST00000445866 GNL2Q13823 731 aaKnown RBP19.97■□□□□ 0.79
SGCE-206ENST00000445866 BAATQ14032 418 aaPredicted RBP19.97■□□□□ 0.79
SGCE-206ENST00000445866 UBE2SQ16763 222 aa19.97■□□□□ 0.79
SGCE-206ENST00000445866 RNF207Q6ZRF8 634 aa19.97■□□□□ 0.79
SGCE-206ENST00000445866 DIS3L2Q8IYB7 885 aaKnown RBP19.97■□□□□ 0.79
SGCE-206ENST00000445866 OXER1Q8TDS5 423 aa19.97■□□□□ 0.79
SGCE-206ENST00000445866 MEIS2O14770 477 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 FCER1AP12319 257 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 KRT2P35908 639 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 NPY5RQ15761 445 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 FOXD4L5Q5VV16 416 aaPredicted RBP19.96■□□□□ 0.79
SGCE-206ENST00000445866 FOXD4L4Q8WXT5 416 aaPredicted RBP19.96■□□□□ 0.79
SGCE-206ENST00000445866 SAGE1Q9NXZ1 904 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 MTMR6Q9Y217 621 aa19.96■□□□□ 0.79
SGCE-206ENST00000445866 SP3Q02447 781 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 KCTD2Q14681 263 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 JAKMIP3Q5VZ66 844 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 PLEKHH3Q7Z736 793 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 FCHSD1Q86WN1 690 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 SAMD3Q8N6K7 520 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms