RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ABCA8O94911 1581 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD65E5RJM6 399 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ATF2P15336 505 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 PHKG2P15735 406 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 ZMAT2Q96NC0 199 aaKnown RBP20.37■□□□□ 0.85
SHANK3-203ENST00000445220 SLC24A3Q9HC58 644 aa20.37■□□□□ 0.85
SHANK3-203ENST00000445220 IFNB1P01574 187 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 ESRRGP62508 458 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 SATB1Q01826 763 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 ARHGEF18Q6ZSZ5 1173 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 GSDMAQ96QA5 445 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 JAG2Q9Y219 1238 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 ERVK-7P63135 1459 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 EMBQ6PCB8 327 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 RETREG2Q8NC44 543 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 CXorf38Q8TB03 319 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 CREB3O43889 395 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 ARHGEF10LQ9HCE6 1279 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 SAP30BPQ9UHR5 308 aaKnown RBP20.36■□□□□ 0.85
SHANK3-203ENST00000445220 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
SHANK3-203ENST00000445220 TTC37Q6PGP7 1564 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 ARHGEF35A5YM69 484 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 SH3BP5O60239 455 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 VPS41P49754 854 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 RASSF7Q02833 373 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 C2orf54Q08AI8 447 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 SEPT2Q15019 361 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 CLIC6Q96NY7 704 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 GCNT3O95395 438 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 POLR2FP61218 127 aaKnown RBP20.35■□□□□ 0.85
SHANK3-203ENST00000445220 TMED1Q13445 227 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD35Q8N283 1001 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.35■□□□□ 0.85
SHANK3-203ENST00000445220 MX2P20592 715 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 MAN1A1P33908 653 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 SLC39A14Q15043 492 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 RSAD2Q8WXG1 361 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 PDLIM2Q96JY6 352 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 RPN1P04843 607 aaKnown RBP20.35■□□□□ 0.85
SHANK3-203ENST00000445220 KMT5BQ4FZB7 885 aa20.35■□□□□ 0.85
SHANK3-203ENST00000445220 MRPL44Q9H9J2 332 aaKnown RBP20.35■□□□□ 0.85
SHANK3-203ENST00000445220 PHEXP78562 749 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 CENPKQ9BS16 269 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 DAAM1Q9Y4D1 1078 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ADAT2Q7Z6V5 191 aaKnown RBP20.34■□□□□ 0.85
SHANK3-203ENST00000445220 PPP6R2O75170 966 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ADCY7P51828 1080 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 PTPROQ16827 1216 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD20A4Q4UJ75 823 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD20A8PQ5CZ79 823 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD20A2Q5SQ80 823 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ANKRD20A1Q5TYW2 823 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 HAUS1Q96CS2 278 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ANGPTL2Q9UKU9 493 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 NCAPH2Q6IBW4 605 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 MYCT1Q8N699 235 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 POLR3EQ9NVU0 708 aa20.34■□□□□ 0.85
SHANK3-203ENST00000445220 ARMCX3Q9UH62 379 aaPredicted RBP20.34■□□□□ 0.85
SHANK3-203ENST00000445220 KDM5CP41229 1560 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 A0A0D9SFI3 127 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 EEF1GP26641 437 aaKnown RBP20.33■□□□□ 0.85
SHANK3-203ENST00000445220 SARM1Q6SZW1 724 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 TBC1D1Q86TI0 1168 aaPredicted RBP20.33■□□□□ 0.85
SHANK3-203ENST00000445220 ATP8A1Q9Y2Q0 1164 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 ZMYM6O95789 1325 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 TAF5LO75529 589 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 EIF3BP55884 814 aaKnown RBP20.33■□□□□ 0.85
SHANK3-203ENST00000445220 CTSWP56202 376 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 PANX2Q96RD6 677 aa20.33■□□□□ 0.85
SHANK3-203ENST00000445220 LSG1Q9H089 658 aaKnown RBP20.33■□□□□ 0.84
SHANK3-203ENST00000445220 RCOR1Q9UKL0 485 aa20.33■□□□□ 0.84
SHANK3-203ENST00000445220 NOVA2Q9UNW9 492 aaKnown RBP20.33■□□□□ 0.84
SHANK3-203ENST00000445220 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.33■□□□□ 0.84
SHANK3-203ENST00000445220 DHX9Q08211 1270 aaKnown RBP20.33■□□□□ 0.84
SHANK3-203ENST00000445220 ST13P4Q8IZP2 240 aaPredicted RBP20.33■□□□□ 0.84
SHANK3-203ENST00000445220 RAB20Q9NX57 234 aa20.33■□□□□ 0.84
SHANK3-203ENST00000445220 PRDM1O75626 825 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 ACRBPQ8NEB7 543 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 TUBGCP2Q9BSJ2 902 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 YY1AP1Q9H869 796 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 AATFQ9NY61 560 aaKnown RBP eCLIP20.32■□□□□ 0.84
SHANK3-203ENST00000445220 BZW2Q9Y6E2 419 aaKnown RBP20.32■□□□□ 0.84
SHANK3-203ENST00000445220 PLEKHG1Q9ULL1 1385 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 SOWAHDA6NJG2 315 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 PGRMC1O00264 195 aaKnown RBP20.32■□□□□ 0.84
SHANK3-203ENST00000445220 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 ARPP21Q9UBL0 812 aaPredicted RBP20.32■□□□□ 0.84
SHANK3-203ENST00000445220 CHMP2AO43633 222 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 DKC1O60832 514 aaKnown RBP eCLIP20.32■□□□□ 0.848e-7■■■■■ 44.8
SHANK3-203ENST00000445220 NAA35Q5VZE5 725 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 TMEM87AQ8NBN3 555 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 PCDHB13Q9Y5F0 798 aa20.32■□□□□ 0.84
SHANK3-203ENST00000445220 SCINQ9Y6U3 715 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms