RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 EPC2Q52LR7 807 aa12.51□□□□□ -0.41
HDAC8-215ENST00000444609 NOL8Q76FK4 1167 aaKnown RBP12.51□□□□□ -0.41
HDAC8-215ENST00000444609 KIAA2013Q8IYS2 634 aa12.51□□□□□ -0.41
HDAC8-215ENST00000444609 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
HDAC8-215ENST00000444609 ZNF214Q9UL59 606 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-215ENST00000444609 ZNF292O60281 2723 aa12.51□□□□□ -0.41
HDAC8-215ENST00000444609 DYNC1LI2O43237 492 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-215ENST00000444609 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-215ENST00000444609 GPM6BQ13491 265 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 GPNMBQ14956 572 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 PI16Q6UXB8 463 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 ARMCX2Q7L311 632 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 TMEM105Q8N8V8 129 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 SAMD11Q96NU1 681 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 CD207Q9UJ71 328 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
HDAC8-215ENST00000444609 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
HDAC8-215ENST00000444609 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-215ENST00000444609 VWA5AO00534 786 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 EYA4O95677 639 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 SHMT1P34896 483 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-215ENST00000444609 SPICE1Q8N0Z3 855 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 FGD4Q96M96 766 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 LRP2BPQ9P2M1 347 aa12.49□□□□□ -0.41
HDAC8-215ENST00000444609 ABHD14A-ACY1A0A1B0GW23 586 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 TBX10O75333 385 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-215ENST00000444609 PTGS1P23219 599 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 ICAM3P32942 547 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 HYAL1Q12794 435 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 BFSP2Q13515 415 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
HDAC8-215ENST00000444609 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
HDAC8-215ENST00000444609 NAA16Q6N069 864 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-215ENST00000444609 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 CNKSR3Q6P9H4 555 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 ADGRA1Q86SQ6 560 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 CCDC144CPQ8IYA2 1237 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 FBXO28Q9NVF7 368 aa12.48□□□□□ -0.41
HDAC8-215ENST00000444609 SCN5AQ14524 2016 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
HDAC8-215ENST00000444609 SMPD1P17405 629 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 MCAMP43121 646 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 PTPN21Q16825 1174 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 SIAH1Q8IUQ4 282 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-215ENST00000444609 MSLNLQ96KJ4 702 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 Q9Y3F1 56 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
HDAC8-215ENST00000444609 MAP1BP46821 2468 aaKnown RBP12.47□□□□□ -0.41
HDAC8-215ENST00000444609 HTRA4P83105 476 aaPredicted RBP12.46□□□□□ -0.41
HDAC8-215ENST00000444609 TCTN1Q2MV58 587 aa12.46□□□□□ -0.41
HDAC8-215ENST00000444609 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
HDAC8-215ENST00000444609 USP44Q9H0E7 712 aa12.46□□□□□ -0.41
HDAC8-215ENST00000444609 VCPKMTQ9H867 229 aa12.46□□□□□ -0.41
HDAC8-215ENST00000444609 TMX2Q9Y320 296 aa12.46□□□□□ -0.41
HDAC8-215ENST00000444609 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
HDAC8-215ENST00000444609 FASNP49327 2511 aaKnown RBP12.45□□□□□ -0.42
HDAC8-215ENST00000444609 LINC01565O15544 149 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 EFCAB14O75071 495 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 LMNAP02545 664 aaKnown RBP12.45□□□□□ -0.42
HDAC8-215ENST00000444609 CXCL10P02778 98 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 ADAM15Q13444 863 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 TMEM192Q8IY95 271 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 KCNG4Q8TDN1 519 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 TEX13BQ9BXU2 312 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 SIP14410 1827 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 USP24Q9UPU5 2620 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 PTPRSQ13332 1948 aa12.45□□□□□ -0.42
HDAC8-215ENST00000444609 ANKRD11Q6UB99 2663 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 MPHOSPH10O00566 681 aaKnown RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 PLCD1P51178 756 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 DYNLL1P63167 89 aaKnown RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 PURAQ00577 322 aaKnown RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 RSPO4Q2I0M5 234 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 FAM47CQ5HY64 1035 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 TMEM63BQ5T3F8 832 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 IQSEC1Q6DN90 963 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 AFAP1L1Q8TED9 768 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 RPGRIP1Q96KN7 1286 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 SEMA4AQ9H3S1 761 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
HDAC8-215ENST00000444609 POLR3EQ9NVU0 708 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 WDR87Q6ZQQ6 2873 aa12.44□□□□□ -0.42
HDAC8-215ENST00000444609 IL16Q14005 1332 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 TET1Q8NFU7 2136 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 NBNO60934 754 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC8-215ENST00000444609 RRP1P56182 461 aaKnown RBP12.43□□□□□ -0.42
HDAC8-215ENST00000444609 GABPAQ06546 454 aa12.43□□□□□ -0.42
HDAC8-215ENST00000444609 IKBKEQ14164 716 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms