RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 RABEP1Q15276 862 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 MORN1Q5T089 497 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 CCDC82Q8N4S0 544 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 PIBF1Q8WXW3 757 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 MPHOSPH6Q99547 160 aaKnown RBP16.32■□□□□ 0.2
SSBP3-208ENST00000444533 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-208ENST00000444533 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
SSBP3-208ENST00000444533 PTPDC1A2A3K4 754 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 CDKL5O76039 1030 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 PLEKHA8P1O95397 391 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
SSBP3-208ENST00000444533 EVCP57679 992 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 MFSD14CQ5VZR4 134 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 TRIM22Q8IYM9 498 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 PIGSQ96S52 555 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 MAF1Q9H063 256 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 GJD2Q9UKL4 321 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 PCDHA1Q9Y5I3 950 aa16.31■□□□□ 0.2
SSBP3-208ENST00000444533 B4DLN1 442 aa16.3■□□□□ 0.2
SSBP3-208ENST00000444533 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
SSBP3-208ENST00000444533 MRPL12P52815 198 aaKnown RBP16.3■□□□□ 0.2
SSBP3-208ENST00000444533 AK2P54819 239 aa16.3■□□□□ 0.2
SSBP3-208ENST00000444533 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
SSBP3-208ENST00000444533 STK3Q13188 491 aa16.3■□□□□ 0.2
SSBP3-208ENST00000444533 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
SSBP3-208ENST00000444533 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
SSBP3-208ENST00000444533 TBC1D32Q96NH3 1257 aa16.3■□□□□ 0.2
SSBP3-208ENST00000444533 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
SSBP3-208ENST00000444533 HMGCRP04035 888 aa16.29■□□□□ 0.2
SSBP3-208ENST00000444533 HOXC6P09630 235 aa16.29■□□□□ 0.2
SSBP3-208ENST00000444533 CAP1Q01518 475 aa16.29■□□□□ 0.2
SSBP3-208ENST00000444533 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
SSBP3-208ENST00000444533 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
SSBP3-208ENST00000444533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSBP3-208ENST00000444533 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
SSBP3-208ENST00000444533 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
SSBP3-208ENST00000444533 ADD3Q9UEY8 706 aaKnown RBP16.29■□□□□ 0.2
SSBP3-208ENST00000444533 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
SSBP3-208ENST00000444533 NID2Q14112 1375 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 CYTH3O43739 400 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 PGK2P07205 417 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 ADD1P35611 737 aaKnown RBP16.28■□□□□ 0.2
SSBP3-208ENST00000444533 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-208ENST00000444533 RGS22Q8NE09 1264 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 USP6NLQ92738 828 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 CUL5Q93034 780 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
SSBP3-208ENST00000444533 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
SSBP3-208ENST00000444533 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
SSBP3-208ENST00000444533 V9GY48 417 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-208ENST00000444533 ZSWIM8A7E2V4 1837 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 PLXNB2O15031 1838 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 ELNP15502 786 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 CALML3P27482 149 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 CDC27P30260 824 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 SSRP1Q08945 709 aaKnown RBP16.27■□□□□ 0.2
SSBP3-208ENST00000444533 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
SSBP3-208ENST00000444533 SH3TC2Q8TF17 1288 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
SSBP3-208ENST00000444533 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
SSBP3-208ENST00000444533 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
SSBP3-208ENST00000444533 CYP39A1Q9NYL5 469 aa16.27■□□□□ 0.2
SSBP3-208ENST00000444533 CNTNAP5Q8WYK1 1306 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 ASB14A6NK59 587 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 NFIBO00712 420 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 CFBP00751 764 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 MCM2P49736 904 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 BAATQ14032 418 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-208ENST00000444533 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-208ENST00000444533 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 SLC26A6Q9BXS9 759 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 RNF26Q9BY78 433 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-208ENST00000444533 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
SSBP3-208ENST00000444533 TPCN1Q9ULQ1 816 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
SSBP3-208ENST00000444533 MYH6P13533 1939 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 GCOM1H8Y6P7 765 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-208ENST00000444533 PFKFB2O60825 505 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 COBLO75128 1261 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 INHAP05111 366 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 POLR2MP0CAP2 368 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 IFNAR1P17181 557 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 XBP1P17861 261 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 NAPAP54920 295 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 ZNF792Q3KQV3 632 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 NPLOC4Q8TAT6 608 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 CLEC4DQ8WXI8 215 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 ARMC5Q96C12 935 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 ABHD8Q96I13 439 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
SSBP3-208ENST00000444533 HMX1Q9NP08 348 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-208ENST00000444533 SH2B1Q9NRF2 756 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms