RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 N6AMT1Q9Y5N5 214 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 USP19O94966 1318 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 CPNE3O75131 537 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 EOMESO95936 686 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 PDE6CP51160 858 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 TMF1P82094 1093 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 C1QBPQ07021 282 aaKnown RBP4.53□□□□□ -1.68
UBR3-206ENST00000444475 SLMAPQ14BN4 828 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 PLCB4Q15147 1175 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 TERF2Q15554 542 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 ABCB5Q2M3G0 1257 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 PCYOX1LQ8NBM8 494 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 UBN1Q9NPG3 1134 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 STARD7Q9NQZ5 370 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 IRAK4Q9NWZ3 460 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 NSMCE4AQ9NXX6 385 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 GPR34Q9UPC5 381 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 KNSTRNQ9Y448 316 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 PCDHB9Q9Y5E1 797 aa4.53□□□□□ -1.68
UBR3-206ENST00000444475 RRN3P2A6NIE6 340 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 H7C0S8 307 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 EIF6P56537 245 aaKnown RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 TGFB2P61812 414 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 CACNB1Q02641 598 aaPredicted RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 C5orf22Q49AR2 442 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 VWA3BQ502W6 1294 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 PRR16Q569H4 304 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 WDR44Q5JSH3 913 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 C4orf50Q6ZRC1 276 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 LSRQ86X29 649 aaPredicted RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 MYCT1Q8N699 235 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 SCG3Q8WXD2 468 aaKnown RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 SLC7A3Q8WY07 619 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 STK31Q9BXU1 1019 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MYLK2Q9H1R3 596 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 RWDD1Q9H446 243 aaPredicted RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 LAMP5Q9UJQ1 280 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 SMARCA2P51531 1590 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MINDY4BA8MYZ0 360 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 CLASP2O75122 1294 aaKnown RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 MT-ND3P03897 115 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 XBP1P17861 261 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 GRB10Q13322 594 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MUM1Q2TAK8 710 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 DGKKQ5KSL6 1271 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MYLK4Q86YV6 388 aaPredicted RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 ZNF619Q8N2I2 560 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MNS1Q8NEH6 495 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 GSDMBQ8TAX9 411 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 GGNBP2Q9H3C7 697 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 FANCFQ9NPI8 374 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MAP10Q9P2G4 905 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 ITM2BQ9Y287 266 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGC5Q9Y5F6 944 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 NEMP1O14524 444 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MCF2LO15068 1137 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 P4HA2O15460 535 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 AOC2O75106 756 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 PRKD3O94806 890 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 LTFP02788 710 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 FOXK2Q01167 660 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 PDE4BQ07343 736 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 NUDT18Q6ZVK8 323 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 NLRP14Q86W24 1093 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 MAP4K3Q8IVH8 894 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 ZNF540Q8NDQ6 660 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 GLIS3Q8NEA6 775 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 USP13Q92995 863 aaPredicted RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 CHCHD3Q9NX63 227 aaKnown RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 SCHIP1Q9P0W5 487 aaPredicted RBP4.52□□□□□ -1.69
UBR3-206ENST00000444475 ZNF232Q9UNY5 417 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 ATAD2Q6PL18 1390 aa4.52□□□□□ -1.69
UBR3-206ENST00000444475 ZBED1O96006 694 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 MSL3P1P0C860 447 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 AKR1B1P15121 316 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 ID4P47928 161 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 ATXN1P54253 815 aaKnown RBP4.51□□□□□ -1.69
UBR3-206ENST00000444475 MRPS35P82673 323 aaKnown RBP4.51□□□□□ -1.69
UBR3-206ENST00000444475 ARHGAP29Q52LW3 1261 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 KRTCAP3Q53RY4 240 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 TRIM61Q5EBN2 209 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 RPUSD3Q6P087 351 aaKnown RBP4.51□□□□□ -1.69
UBR3-206ENST00000444475 MFSD6Q6ZSS7 791 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 KRT74Q7RTS7 529 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 ZMIZ2Q8NF64 920 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 SLC35G2Q8TBE7 412 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 BICD2Q8TD16 824 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 MGARPQ8TDB4 240 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 EDEM1Q92611 657 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 TEKT1Q969V4 418 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 SLC26A6Q9BXS9 759 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 C2orf40Q9H1Z8 148 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 SPON1Q9HCB6 807 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 TRIM39Q9HCM9 518 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 C1orf112Q9NSG2 853 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 CCDC39Q9UFE4 941 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 RCAN3Q9UKA8 241 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 ZNRF3Q9ULT6 936 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 GIT1Q9Y2X7 761 aa4.51□□□□□ -1.69
UBR3-206ENST00000444475 C2CD2Q9Y426 696 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms