RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 SNX27Q96L92 541 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 TRMT13Q9NUP7 481 aaKnown RBP12.11□□□□□ -0.47
COMMD1-203ENST00000444166 NYAP2Q9P242 653 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 ZDBF2Q9HCK1 2354 aa12.11□□□□□ -0.47
COMMD1-203ENST00000444166 CACNA1HO95180 2353 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 DYNC1LI2O43237 492 aaPredicted RBP12.1□□□□□ -0.47
COMMD1-203ENST00000444166 ZEB2O60315 1214 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 ADD2P35612 726 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 NHLH1Q02575 133 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 TMEM63BQ5T3F8 832 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 TAPT1Q6NXT6 567 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 FAM178BQ8IXR5 827 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
COMMD1-203ENST00000444166 AP5M1Q9H0R1 490 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 A1CFQ9NQ94 594 aaKnown RBP12.1□□□□□ -0.47
COMMD1-203ENST00000444166 LMCD1Q9NZU5 365 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 Q9Y3F1 56 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 SCN10AQ9Y5Y9 1956 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 TNKSO95271 1327 aa12.1□□□□□ -0.47
COMMD1-203ENST00000444166 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.09□□□□□ -0.47
COMMD1-203ENST00000444166 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 ASB14A6NK59 587 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 ACTN1P12814 892 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 RASA1P20936 1047 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 RFC2P35250 354 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 GJD3Q8N144 294 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 KIFC2Q96AC6 838 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 EXOC6BQ9Y2D4 811 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 DDX49Q9Y6V7 483 aaKnown RBP12.09□□□□□ -0.47
COMMD1-203ENST00000444166 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
COMMD1-203ENST00000444166 TANC1Q9C0D5 1861 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 CHGBP05060 677 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 LEXMQ3ZCV2 418 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 IQSEC1Q6DN90 963 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 DNAJC2Q99543 621 aaKnown RBP12.08□□□□□ -0.48
COMMD1-203ENST00000444166 UBE2ZQ9H832 354 aaPredicted RBP12.08□□□□□ -0.48
COMMD1-203ENST00000444166 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 IL1RAPL2Q9NP60 686 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 CFAP54Q96N23 3096 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 ZNF536O15090 1300 aa12.08□□□□□ -0.48
COMMD1-203ENST00000444166 LCHNA4D1U4 455 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 KIF28PB7ZC32 967 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 IQCF3P0C7M6 154 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 PURAQ00577 322 aaKnown RBP12.07□□□□□ -0.48
COMMD1-203ENST00000444166 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
COMMD1-203ENST00000444166 MORC4Q8TE76 937 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 MKL1Q969V6 931 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 KCNH6Q9H252 994 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 SYNPO2Q9UMS6 1093 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 CTDP1Q9Y5B0 961 aaPredicted RBP12.07□□□□□ -0.48
COMMD1-203ENST00000444166 MYH4Q9Y623 1939 aa12.07□□□□□ -0.48
COMMD1-203ENST00000444166 SPTBN4Q9H254 2564 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 LCTP09848 1927 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 BAIAP3O94812 1187 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 FDX1P10109 184 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 ALADP13716 330 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 DUSP28Q4G0W2 176 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 RPAP2Q8IXW5 612 aaPredicted RBP12.06□□□□□ -0.48
COMMD1-203ENST00000444166 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.06□□□□□ -0.48
COMMD1-203ENST00000444166 RHPN1Q8TCX5 695 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 FBXL18Q96ME1 805 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 VTA1Q9NP79 307 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 RNF146Q9NTX7 359 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 PAG1Q9NWQ8 432 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
COMMD1-203ENST00000444166 CLIP2Q9UDT6 1046 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 COG6Q9Y2V7 657 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 SLC4A4Q9Y6R1 1079 aa12.06□□□□□ -0.48
COMMD1-203ENST00000444166 CACNA1AO00555 2505 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 IL9P15248 144 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 TKFCQ3LXA3 575 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 SBK1Q52WX2 424 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 EEPD1Q7L9B9 569 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 POLR3EQ9NVU0 708 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 MYO7AQ13402 2215 aa12.05□□□□□ -0.48
COMMD1-203ENST00000444166 MYH7P12883 1935 aa12.04□□□□□ -0.48
COMMD1-203ENST00000444166 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
COMMD1-203ENST00000444166 RLBP1P12271 317 aa12.04□□□□□ -0.48
COMMD1-203ENST00000444166 KCNA5P22460 613 aa12.04□□□□□ -0.48
COMMD1-203ENST00000444166 ERVK-21P61565 698 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms