RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 WBP1LQ9NX94 342 aa18.2■□□□□ 0.5
USP40-206ENST00000443711 BARHL2Q9NY43 387 aa18.2■□□□□ 0.5
USP40-206ENST00000443711 MRPL11Q9Y3B7 192 aaKnown RBP18.2■□□□□ 0.5
USP40-206ENST00000443711 XBP1P17861 261 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 GJB2P29033 226 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 NCAPG2Q86XI2 1143 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 FAM177A1Q8N128 213 aaPredicted RBP18.19■□□□□ 0.5
USP40-206ENST00000443711 CCDC12Q8WUD4 166 aaPredicted RBP18.19■□□□□ 0.5
USP40-206ENST00000443711 ALG1Q9BT22 464 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 MROH8Q9H579 483 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 SH3GLB2Q9NR46 395 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 RNF146Q9NTX7 359 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 FOXD4L1Q9NU39 408 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 DAXXQ9UER7 740 aaPredicted RBP18.19■□□□□ 0.5
USP40-206ENST00000443711 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 RIPK3Q9Y572 518 aa18.19■□□□□ 0.5
USP40-206ENST00000443711 STXBP3O00186 592 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 ERCC3P19447 782 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 NAPAP54920 295 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 PPP1R18Q6NYC8 613 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 JMYQ8N9B5 988 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 CCDC148Q8NFR7 591 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 AIFM3Q96NN9 605 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 ACAD9Q9H845 621 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 HOMER2Q9NSB8 354 aa18.18■□□□□ 0.5
USP40-206ENST00000443711 TAL1P17542 331 aaPredicted RBP18.17■□□□□ 0.5
USP40-206ENST00000443711 MAPK4P31152 587 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 TRIM29Q14134 588 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 MCF2L2Q86YR7 1114 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 SPRYD3Q8NCJ5 442 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 MAF1Q9H063 256 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 PORCNQ9H237 461 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
USP40-206ENST00000443711 VPS54Q9P1Q0 977 aa18.17■□□□□ 0.5
USP40-206ENST00000443711 GPR25O00155 361 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 SP3Q02447 781 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
USP40-206ENST00000443711 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 WDR78Q5VTH9 848 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 RGS22Q8NE09 1264 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 CLEC4DQ8WXI8 215 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 GLT8D2Q9H1C3 349 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 EFCC1Q9HA90 598 aa18.16■□□□□ 0.5
USP40-206ENST00000443711 ZNFX1Q9P2E3 1918 aaKnown RBP18.15■□□□□ 0.5
USP40-206ENST00000443711 ESYT2A0FGR8 921 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 SMCO2A6NFE2 343 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 PDCP20941 246 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 MRPL12P52815 198 aaKnown RBP18.15■□□□□ 0.5
USP40-206ENST00000443711 NLRP5P59047 1200 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 KIF22Q14807 665 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 TYW1BQ6NUM6 668 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP40-206ENST00000443711 SAMD3Q8N6K7 520 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 C8orf76Q96K31 380 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 C6orf50Q9HD87 102 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 MGAMO43451 1857 aa18.15■□□□□ 0.5
USP40-206ENST00000443711 NFIBO00712 420 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 STRNO43815 780 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 FCER1AP12319 257 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 CALML3P27482 149 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 GNA11P29992 359 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 ADCY7P51828 1080 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 LACTBP83111 547 aaPredicted RBP18.14■□□□□ 0.49
USP40-206ENST00000443711 LARP1BQ659C4 914 aaKnown RBP18.14■□□□□ 0.49
USP40-206ENST00000443711 GALNT17Q6IS24 598 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 NSMFQ6X4W1 530 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 PLEKHH3Q7Z736 793 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 TEX2Q8IWB9 1127 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 CUL5Q93034 780 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 ZMYND12Q9H0C1 365 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 RIC8AQ9NPQ8 531 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 MAP3K20Q9NYL2 800 aaKnown RBP18.14■□□□□ 0.49
USP40-206ENST00000443711 IVNS1ABPQ9Y6Y0 642 aa18.14■□□□□ 0.49
USP40-206ENST00000443711 RBBP6Q7Z6E9 1792 aaKnown RBP18.13■□□□□ 0.49
USP40-206ENST00000443711 OPLAHO14841 1288 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 FKTNO75072 461 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 CFBP00751 764 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 FOSBP53539 338 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 FCGRTP55899 365 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 KCTD2Q14681 263 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 KRT40Q6A162 431 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 GPR142Q7Z601 462 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 ABRAQ8N0Z2 381 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 ANKRD35Q8N283 1001 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 BICD2Q8TD16 824 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 MMP19Q99542 508 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 PHF20Q9BVI0 1012 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 GJB4Q9NTQ9 266 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 PLXNB2O15031 1838 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 DOCK3Q8IZD9 2030 aa18.13■□□□□ 0.49
USP40-206ENST00000443711 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
USP40-206ENST00000443711 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 PTPREP23469 700 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 PSMC4P43686 418 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 GHRHRQ02643 423 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 FBXO18Q8NFZ0 1043 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 TBC1D5Q92609 795 aa18.12■□□□□ 0.49
USP40-206ENST00000443711 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms