RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 COBLO75128 1261 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SGPL1O95470 568 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CNGA1P29973 690 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CYP2C19P33261 490 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SNAP25P60880 206 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CACNB2Q08289 660 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TROAPQ12815 778 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 BLOC1S2Q6QNY1 142 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 NSMFQ6X4W1 530 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DHX32Q7L7V1 743 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 IGDCC4Q8TDY8 1250 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 JAKMIP1Q96N16 626 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 LZTS2Q9BRK4 669 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TINF2Q9BSI4 451 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MAF1Q9H063 256 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 A1CFQ9NQ94 594 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ADD3Q9UEY8 706 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DNAJC25-GNG10A0A024R161 153 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PALM3A6NDB9 673 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 B4DLN1 442 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CYBAP13498 195 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MRPL12P52815 198 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TRIM32Q13049 653 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ZNF792Q3KQV3 632 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 USH1GQ495M9 461 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 AMNQ9BXJ7 453 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 UBA5Q9GZZ9 404 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
HLA-DQB1-206ENST00000443574 KIAA1217Q5T5P2 1943 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 LOC102724159A0A0B4J2E5 919 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ASB14A6NK59 587 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ZBTB5O15062 677 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 EN2P19622 333 aaPredicted RBP12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PWP2Q15269 919 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 QRICH1Q2TAL8 776 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 POTEHQ6S545 545 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RNF207Q6ZRF8 634 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MICU3Q86XE3 530 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MCF2L2Q86YR7 1114 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 STAG2Q8N3U4 1231 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 JMJD4Q9H9V9 463 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 VAT1LQ9HCJ6 419 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CYP39A1Q9NYL5 469 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
HLA-DQB1-206ENST00000443574 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SEPT4O43236 478 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ZBTB43O43298 467 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SMARCA1P28370 1054 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RCAN1P53805 252 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ADCK5Q3MIX3 580 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MUM1L1Q5H9M0 696 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MAMDC4Q6UXC1 1216 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 FAM133AQ8N9E0 248 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 KCNB2Q92953 911 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SHISA4Q96DD7 197 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 HTATIP2Q9BUP3 242 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ABHD16BQ9H3Z7 469 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 SENP2Q9HC62 589 aa12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 DDX20Q9UHI6 824 aaKnown RBP12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
HLA-DQB1-206ENST00000443574 NFIBO00712 420 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RARBP10826 455 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 AKR1A1P14550 325 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CALML3P27482 149 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 APOA5Q6Q788 366 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ARMCX2Q7L311 632 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 MYL10Q9BUA6 226 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ZHX1Q9UKY1 873 aaPredicted RBP11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CYP46A1Q9Y6A2 500 aa11.99□□□□□ -0.49
HLA-DQB1-206ENST00000443574 ALPK3Q96L96 1907 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 PNMA6FA0A0J9YX94 578 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 KLF18A0A0U1RQI7 1052 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 CCDC196A0A1B0GTZ2 297 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 GOLGA8AA7E2F4 631 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 GOLGA8BA8MQT2 603 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 IGHA2P01877 340 aa11.98□□□□□ -0.49
HLA-DQB1-206ENST00000443574 RPS6KB1P23443 525 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms