RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 COPB2P35606 906 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 EVCP57679 992 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 CACNB2Q08289 660 aaPredicted RBP14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 TMTC3Q6ZXV5 915 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 RUFY3Q7L099 469 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 MICU3Q86XE3 530 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 FAM133AQ8N9E0 248 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 CHST13Q8NET6 341 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 BRF1Q92994 677 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 PIGSQ96S52 555 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 ACAD9Q9H845 621 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 VAT1LQ9HCJ6 419 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 IVNS1ABPQ9Y6Y0 642 aa14.97□□□□□ -0.01
PDLIM2-212ENST00000443561 CCDC69A6NI79 296 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 CCDC85CA6NKD9 419 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 HMGB1P09429 215 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 CCL5P13501 91 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 CCND3P30281 292 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 CYP2C19P33261 490 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 TKFCQ3LXA3 575 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 USH1GQ495M9 461 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 OLFML2BQ68BL8 750 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 NFXL1Q6ZNB6 911 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 LARP6Q9BRS8 491 aaKnown RBP14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 SPZ1Q9BXG8 430 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 PAK6Q9NQU5 681 aaPredicted RBP14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 CYP39A1Q9NYL5 469 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 COL20A1Q9P218 1284 aa14.96□□□□□ -0.01
PDLIM2-212ENST00000443561 MKI67P46013 3256 aaKnown RBP14.96□□□□□ -0.02
PDLIM2-212ENST00000443561 hCG_1642624A0A1W2PR95 340 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 CYBAP13498 195 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 ANAPC15P60006 121 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 TMTC2Q8N394 836 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 FANCBQ8NB91 859 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 KATNBL1Q9H079 304 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 SLC12A7Q9Y666 1083 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 KIAA1217Q5T5P2 1943 aa14.95□□□□□ -0.02
PDLIM2-212ENST00000443561 ZBTB5O15062 677 aa14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 SNAI1O95863 264 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 GHRHRQ02643 423 aa14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 KCTD2Q14681 263 aa14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 PRAMEF19Q5SWL8 479 aa14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 HOMER1Q86YM7 354 aa14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 FBXO40Q9UH90 709 aa14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 TNRC18O15417 2968 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-212ENST00000443561 GOLGA8AA7E2F4 631 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 GOLGA8BA8MQT2 603 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 ZBTB43O43298 467 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 ADCY6O43306 1168 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 LARGE1O95461 756 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 EN2P19622 333 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 PSMA5P28066 241 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 ADD1P35611 737 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 ST3GAL1Q11201 340 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 BAATQ14032 418 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 NTRK3Q16288 839 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 TYW1BQ6NUM6 668 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 NSMFQ6X4W1 530 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 DPP9Q86TI2 863 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 FBXO11Q86XK2 927 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 CTCFLQ8NI51 663 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 PIBF1Q8WXW3 757 aa14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 NCOA5Q9HCD5 579 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 DIS3Q9Y2L1 958 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 CTDP1Q9Y5B0 961 aaPredicted RBP14.93□□□□□ -0.02
PDLIM2-212ENST00000443561 DTNBO60941 627 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 SMARCA1P28370 1054 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 RCAN1P53805 252 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 RTN1Q16799 776 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 LHX8Q68G74 356 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 CYP46A1Q9Y6A2 500 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 ABCB11O95342 1321 aa14.92□□□□□ -0.02
PDLIM2-212ENST00000443561 PNMA6FA0A0J9YX94 578 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 ADAMTS3O15072 1205 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 DHX16O60231 1041 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 ZNF865P0CJ78 1059 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 CALM1P0DP23 149 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 CALM2P0DP24 149 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 CALM3P0DP25 149 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 PTGS1P23219 599 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 KIF5BP33176 963 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 RBM25P49756 843 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 AK2P54819 239 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 RPS6P62753 249 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 UBE2Q1Q7Z7E8 422 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 TRMT44Q8IYL2 757 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 MORC4Q8TE76 937 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 LENG1Q96BZ8 264 aaPredicted RBP14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 DDX11Q96FC9 970 aa14.91□□□□□ -0.02
PDLIM2-212ENST00000443561 TINF2Q9BSI4 451 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms