RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 CCDC174Q6PII3 467 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 USP17L6PQ6QN14 398 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 CERS3Q8IU89 383 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 CNGA4Q8IV77 575 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 COA1Q9GZY4 146 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 TDRD3Q9H7E2 651 aaKnown RBP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 BARHL2Q9NY43 387 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 PCDHA6Q9UN73 950 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 SAMM50Q9Y512 469 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 PCDHA8Q9Y5H6 950 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 FAM205AQ6ZU69 1335 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 ZBTB22O15209 634 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 MYO1BO43795 1136 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 C21orf2O43822 256 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 AKR1B10O60218 316 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 MATR3P43243 847 aaKnown RBP eCLIP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 PLS1Q14651 629 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 MTF1Q14872 753 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 NCAPHQ15003 741 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 AOC3Q16853 763 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 SKIDA1Q1XH10 827 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 PRR16Q569H4 304 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 SLFN13Q68D06 897 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 NCAPH2Q6IBW4 605 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 POTEDQ86YR6 584 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 CAPZA3Q96KX2 299 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 DISC1Q9NRI5 854 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 FAM207AQ9NSI2 230 aaPredicted RBP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 MAD2L2Q9UI95 211 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 PCDHA12Q9UN75 941 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 MACROD2A1Z1Q3 448 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 USP17L10C9JJH3 530 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 NPR1P16066 1061 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 PRCPP42785 496 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 CRKP46108 304 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 MCM6Q14566 821 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 KMT5BQ4FZB7 885 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 E4F1Q66K89 784 aaPredicted RBP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 TOGARAM2Q6ZUX3 1019 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
C2CD3-207ENST00000442398 BPIFA3Q9BQP9 254 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 JADE2Q9NQC1 790 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 ZBTB21Q9ULJ3 1066 aa6.89□□□□□ -1.31
C2CD3-207ENST00000442398 GOLGA6L9A6NEM1 432 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 B4DLN1 442 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 TDP2O95551 362 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 RHOXF2BP0C7M4 288 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 TM4SF1P30408 202 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 TNNT3P45378 269 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 COPB1P53618 953 aaKnown RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 CYP4A11Q02928 519 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 DDR1Q08345 913 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 NFIAQ12857 509 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 KRT31Q15323 416 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 HERC4Q5GLZ8 1057 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 RCSD1Q6JBY9 416 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 TYW1BQ6NUM6 668 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 MIGA2Q7L4E1 593 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 CPXCR1Q8N123 301 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 NEDD1Q8NHV4 660 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 KIFC2Q96AC6 838 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 CSRNP1Q96S65 589 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 RHOXF2Q9BQY4 288 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 RTFDC1Q9BY42 306 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 OSBPL5Q9H0X9 879 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 DDX25Q9UHL0 483 aaKnown RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 SBF2Q86WG5 1849 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 CD44P16070 742 aaKnown RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 BMP6P22004 513 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 MAEAQ7L5Y9 396 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 FAM114A1Q8IWE2 563 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 ACRBPQ8NEB7 543 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 HOMER2Q9NSB8 354 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 SPATA31A6Q5VVP1 1343 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 BICDL2A1A5D9 508 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 DDX39AO00148 427 aaKnown RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 HOXA13P31271 388 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 FAM193AP78312 1265 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 SEPT2Q15019 361 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 ZNF658Q5TYW1 1059 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 ERO1AQ96HE7 468 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 PSMB7Q99436 277 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 HINFPQ9BQA5 517 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 CRACR2AQ9BSW2 395 aa6.88□□□□□ -1.31
C2CD3-207ENST00000442398 CCDC94Q9BW85 323 aaPredicted RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 GOLGB1Q14789 3259 aaKnown RBP6.88□□□□□ -1.31
C2CD3-207ENST00000442398 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
C2CD3-207ENST00000442398 GPR75-ASB3A0A0A6YYF3 556 aa6.87□□□□□ -1.31
C2CD3-207ENST00000442398 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
C2CD3-207ENST00000442398 MEIS1O00470 390 aa6.87□□□□□ -1.31
C2CD3-207ENST00000442398 ADAMTS3O15072 1205 aa6.87□□□□□ -1.31
C2CD3-207ENST00000442398 CYTH3O43739 400 aa6.87□□□□□ -1.31
C2CD3-207ENST00000442398 GTF2F1P35269 517 aaKnown RBP eCLIP6.87□□□□□ -1.31
C2CD3-207ENST00000442398 ABCB5Q2M3G0 1257 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms