RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SOWAHBA6NEL2 793 aa27.57■■■□□ 2
VARS-217ENST00000440048 KLRF2D3W0D1 207 aa27.57■■■□□ 2
VARS-217ENST00000440048 NFIBO00712 420 aa27.57■■■□□ 2
VARS-217ENST00000440048 DHX16O60231 1041 aaKnown RBP27.57■■■□□ 2
VARS-217ENST00000440048 ZNF865P0CJ78 1059 aaPredicted RBP27.57■■■□□ 2
VARS-217ENST00000440048 TROAPQ12815 778 aa27.57■■■□□ 2
VARS-217ENST00000440048 ANO1Q5XXA6 986 aa27.57■■■□□ 2
VARS-217ENST00000440048 JMJD4Q9H9V9 463 aa27.57■■■□□ 2
VARS-217ENST00000440048 VAT1LQ9HCJ6 419 aa27.57■■■□□ 2
VARS-217ENST00000440048 CNPY2Q9Y2B0 182 aa27.57■■■□□ 2
VARS-217ENST00000440048 USH1GQ495M9 461 aa27.56■■■□□ 2
VARS-217ENST00000440048 CATIPQ7Z7H3 387 aa27.56■■■□□ 2
VARS-217ENST00000440048 RASEFQ8IZ41 740 aa27.56■■■□□ 2
VARS-217ENST00000440048 TMEM87BQ96K49 555 aa27.56■■■□□ 2
VARS-217ENST00000440048 BAZ2BQ9UIF8 2168 aaKnown RBP27.56■■■□□ 2
VARS-217ENST00000440048 SH2B2O14492 632 aaPredicted RBP27.55■■■□□ 2
VARS-217ENST00000440048 BAATQ14032 418 aaPredicted RBP27.55■■■□□ 2
VARS-217ENST00000440048 QRICH1Q2TAL8 776 aa27.55■■■□□ 2
VARS-217ENST00000440048 TSGA10IPQ3SY00 556 aa27.55■■■□□ 2
VARS-217ENST00000440048 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.55■■■□□ 2
VARS-217ENST00000440048 ARMCX2Q7L311 632 aa27.54■■■□□ 2
VARS-217ENST00000440048 CCDC144CPQ8IYA2 1237 aa27.54■■■□□ 2
VARS-217ENST00000440048 C11orf49Q9H6J7 331 aa27.54■■■□□ 2
VARS-217ENST00000440048 ALPK3Q96L96 1907 aa27.53■■■□□ 2
VARS-217ENST00000440048 ASTN1O14525 1302 aa27.53■■■□□ 2
VARS-217ENST00000440048 ZNF654Q8IZM8 581 aa27.53■■■□□ 2
VARS-217ENST00000440048 NEK1Q96PY6 1258 aa27.53■■■□□ 2
VARS-217ENST00000440048 PURBQ96QR8 312 aaKnown RBP27.53■■■□□ 2
VARS-217ENST00000440048 PTPDC1A2A3K4 754 aa27.52■■■□□ 2
VARS-217ENST00000440048 ACVR2BQ13705 512 aa27.52■■■□□ 2
VARS-217ENST00000440048 SLC35G1Q2M3R5 365 aa27.52■■■□□ 2
VARS-217ENST00000440048 FBXO11Q86XK2 927 aa27.52■■■□□ 2
VARS-217ENST00000440048 TMTC2Q8N394 836 aa27.52■■■□□ 2
VARS-217ENST00000440048 NUP133Q8WUM0 1156 aa27.52■■■□□ 2
VARS-217ENST00000440048 MTMR8Q96EF0 704 aa27.52■■■□□ 2
VARS-217ENST00000440048 LRRC2Q9BYS8 371 aa27.52■■■□□ 2
VARS-217ENST00000440048 ABHD16BQ9H3Z7 469 aa27.52■■■□□ 2
VARS-217ENST00000440048 ZHX1Q9UKY1 873 aaPredicted RBP27.52■■■□□ 2
VARS-217ENST00000440048 NR2E3Q9Y5X4 410 aa27.52■■■□□ 2
VARS-217ENST00000440048 ABCB11O95342 1321 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 ASB14A6NK59 587 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 DDAH1O94760 285 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 COL6A1P12109 1028 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 AKR1A1P14550 325 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 LIFRP42702 1097 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 ADCK5Q3MIX3 580 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 SLC30A10Q6XR72 485 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 NFXL1Q6ZNB6 911 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 RNF207Q6ZRF8 634 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 MYL10Q9BUA6 226 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 DNAH12Q6ZR08 3092 aa27.51■■□□□ 1.99
VARS-217ENST00000440048 REC8O95072 547 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 RARBP10826 455 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 KRT32Q14532 448 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 ARRDC4Q8NCT1 418 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 KCNB2Q92953 911 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 MAP3K14Q99558 947 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 KATNBL1Q9H079 304 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 RIOX1Q9H6W3 641 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 FAM184BQ9ULE4 1060 aa27.5■■□□□ 1.99
VARS-217ENST00000440048 DDX49Q9Y6V7 483 aaKnown RBP27.5■■□□□ 1.99
VARS-217ENST00000440048 CCDC69A6NI79 296 aa27.49■■□□□ 1.99
VARS-217ENST00000440048 H0YGN5 161 aa27.49■■□□□ 1.99
VARS-217ENST00000440048 DNM1LO00429 736 aa27.49■■□□□ 1.99
VARS-217ENST00000440048 CALML3P27482 149 aa27.49■■□□□ 1.99
VARS-217ENST00000440048 HSPA4P34932 840 aa27.49■■□□□ 1.99
VARS-217ENST00000440048 RPS6P62753 249 aaKnown RBP27.49■■□□□ 1.99
VARS-217ENST00000440048 GJC2Q5T442 439 aaPredicted RBP27.49■■□□□ 1.99
VARS-217ENST00000440048 RGS22Q8NE09 1264 aa27.49■■□□□ 1.99
VARS-217ENST00000440048 LENG1Q96BZ8 264 aaPredicted RBP27.49■■□□□ 1.99
VARS-217ENST00000440048 LRRC37A2A6NM11 1700 aa27.48■■□□□ 1.99
VARS-217ENST00000440048 ZBTB5O15062 677 aa27.48■■□□□ 1.99
VARS-217ENST00000440048 CYTH3O43739 400 aa27.48■■□□□ 1.99
VARS-217ENST00000440048 EXOSC10Q01780 885 aaKnown RBP27.48■■□□□ 1.99
VARS-217ENST00000440048 DHX32Q7L7V1 743 aaKnown RBP27.48■■□□□ 1.99
VARS-217ENST00000440048 AMNQ9BXJ7 453 aa27.48■■□□□ 1.99
VARS-217ENST00000440048 XPNPEP3Q9NQH7 507 aa27.48■■□□□ 1.99
VARS-217ENST00000440048 ADD3Q9UEY8 706 aaKnown RBP27.48■■□□□ 1.99
VARS-217ENST00000440048 TRIOBPQ9H2D6 2365 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 PPP1R11O60927 126 aaPredicted RBP27.47■■□□□ 1.99
VARS-217ENST00000440048 SLC34A2O95436 690 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 MYCNP04198 464 aaPredicted RBP27.47■■□□□ 1.99
VARS-217ENST00000440048 ALDH5A1P51649 535 aaPredicted RBP27.47■■□□□ 1.99
VARS-217ENST00000440048 LRRC41Q15345 812 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 CCDC144BQ3MJ40 725 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 CTCFLQ8NI51 663 aaPredicted RBP27.47■■□□□ 1.99
VARS-217ENST00000440048 MORC4Q8TE76 937 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 TBC1D5Q92609 795 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 TCEANC2Q96MN5 208 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 PIGSQ96S52 555 aa27.47■■□□□ 1.99
VARS-217ENST00000440048 MRPL11Q9Y3B7 192 aaKnown RBP27.47■■□□□ 1.99
VARS-217ENST00000440048 EVI5O60447 810 aa27.46■■□□□ 1.99
VARS-217ENST00000440048 PGK1P00558 417 aa27.46■■□□□ 1.99
VARS-217ENST00000440048 KIF5BP33176 963 aa27.46■■□□□ 1.99
VARS-217ENST00000440048 SGMS1Q86VZ5 419 aa27.46■■□□□ 1.99
VARS-217ENST00000440048 HOMER1Q86YM7 354 aa27.46■■□□□ 1.99
VARS-217ENST00000440048 SNX14Q9Y5W7 946 aa27.46■■□□□ 1.99
VARS-217ENST00000440048 KBTBD13C9JR72 458 aa27.45■■□□□ 1.98
VARS-217ENST00000440048 SENP6Q9GZR1 1112 aaPredicted RBP27.45■■□□□ 1.98
VARS-217ENST00000440048 MAF1Q9H063 256 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms