RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ASTN1O14525 1302 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 LRRC37A2A6NM11 1700 aa19.13■□□□□ 0.65
SNRPD3-204ENST00000439775 RAD50Q92878 1312 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 GSPT1P15170 499 aaKnown RBP19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 GJA9P57773 515 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 NKX3-2P78367 333 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 TLE2Q04725 743 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 IMMTQ16891 758 aaKnown RBP19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 GPATCH4Q5T3I0 446 aaKnown RBP19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 TTC22Q5TAA0 569 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 SPC25Q9HBM1 224 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 GPCPD1Q9NPB8 672 aa19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 PRDM5Q9NQX1 630 aaPredicted RBP19.12■□□□□ 0.65
SNRPD3-204ENST00000439775 WDR19Q8NEZ3 1342 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 MYADML2A6NDP7 307 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 KDM4AO75164 1064 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 C6orf222P0C671 652 aaPredicted RBP19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 KCNA10Q16322 511 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 NSMFQ6X4W1 530 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 ANKRD33Q7Z3H0 272 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 PCSK9Q8NBP7 692 aaKnown RBP19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 STARD7Q9NQZ5 370 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 MCM3APO60318 1980 aa19.11■□□□□ 0.65
SNRPD3-204ENST00000439775 ELP1O95163 1332 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 CLTBP09497 229 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 MORC4Q8TE76 937 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 ANKS1AQ92625 1134 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 TOX2Q96NM4 488 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 ZKSCAN3Q9BRR0 538 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 IL25Q9H293 177 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 CNNM2Q9H8M5 875 aa19.1■□□□□ 0.65
SNRPD3-204ENST00000439775 TRIM43BA6NCK2 446 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 B4E1Z4 1266 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 NFIBO00712 420 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 TNFAIP2Q03169 654 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 SH3RF1Q7Z6J0 888 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 PNMA1Q8ND90 353 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 TRIM43Q96BQ3 446 aaPredicted RBP19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 GLT1D1Q96MS3 346 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 ZSCAN10Q96SZ4 725 aaPredicted RBP19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 KRT23Q9C075 422 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 ADD3Q9UEY8 706 aaKnown RBP19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 GNEQ9Y223 722 aaKnown RBP19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 LCTP09848 1927 aa19.09■□□□□ 0.65
SNRPD3-204ENST00000439775 MROH7Q68CQ1 1323 aa19.08■□□□□ 0.65
SNRPD3-204ENST00000439775 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 KIAA0355O15063 1070 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 CTAGE5O15320 804 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 PQBP1O60828 265 aaKnown RBP19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 ASGR1P07306 291 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 ENAHQ8N8S7 591 aaPredicted RBP19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 CLEC4DQ8WXI8 215 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 BADQ92934 168 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 KAT14Q9H8E8 782 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 VTA1Q9NP79 307 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 ZSWIM5Q9P217 1185 aa19.08■□□□□ 0.64
SNRPD3-204ENST00000439775 LAMA2P24043 3122 aaKnown RBP19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 TNKSO95271 1327 aa19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 ALDH5A1P51649 535 aaPredicted RBP19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 IRX5P78411 483 aaPredicted RBP19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 BAATQ14032 418 aaPredicted RBP19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 GNASQ5JWF2 1037 aa19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 FBXO16Q8IX29 292 aaPredicted RBP19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 RUFY2Q8WXA3 655 aa19.07■□□□□ 0.64
SNRPD3-204ENST00000439775 PTPDC1A2A3K4 754 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 DCDC2CA8MYV0 355 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 ASPRV1Q53RT3 343 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 IQSEC1Q6DN90 963 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 TAPT1Q6NXT6 567 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 SLC30A10Q6XR72 485 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 TLK2Q86UE8 772 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 PURBQ96QR8 312 aaKnown RBP19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 UBAC1Q9BSL1 405 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 Q9Y3F1 56 aa19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 DDX49Q9Y6V7 483 aaKnown RBP19.06■□□□□ 0.64
SNRPD3-204ENST00000439775 A0A0U1RQG5 324 aaPredicted RBP19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 GOLGA8HP0CJ92 632 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 SMPD1P17405 629 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 ITGB8P26012 769 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 CDK7P50613 346 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 RNF207Q6ZRF8 634 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 NOL8Q76FK4 1167 aaKnown RBP19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 MAF1Q9H063 256 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 TMEM39AQ9NV64 488 aa19.05■□□□□ 0.64
SNRPD3-204ENST00000439775 CABYRO75952 493 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 RAG1P15918 1043 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 CHMLP26374 656 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 RPS6P62753 249 aaKnown RBP19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 CDC37Q16543 378 aaPredicted RBP19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 FSCN1Q16658 493 aaKnown RBP19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 EEPD1Q7L9B9 569 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 DEFB123Q8N688 67 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 RGS22Q8NE09 1264 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 DNERQ8NFT8 737 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 AP5M1Q9H0R1 490 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 PDGFCQ9NRA1 345 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms