RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
TSC2-206ENST00000439117 BBOX1O75936 387 aa16.45■□□□□ 0.22
TSC2-206ENST00000439117 CASP8Q14790 479 aa16.45■□□□□ 0.22
TSC2-206ENST00000439117 SLC35F6Q8N357 371 aa16.45■□□□□ 0.22
TSC2-206ENST00000439117 RILPQ96NA2 401 aa16.45■□□□□ 0.22
TSC2-206ENST00000439117 BAG2O95816 211 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 SKIP12755 728 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 ITIH3Q06033 890 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 NBPF9Q3BBW0 867 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 SPATA1Q5VX52 437 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 KCNJ14Q9UNX9 436 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 ZBED4O75132 1171 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 SESN3P58005 492 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 CPXCR1Q8N123 301 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 TMEM87AQ8NBN3 555 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
TSC2-206ENST00000439117 MAK16Q9BXY0 300 aaKnown RBP16.44■□□□□ 0.22
TSC2-206ENST00000439117 SERTAD1Q9UHV2 236 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 PALD1Q9ULE6 856 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 LMTK2Q8IWU2 1503 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 BTDP43251 543 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 TAF11Q15544 211 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 ARHGAP42A6NI28 874 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 KCNJ18B7U540 433 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 KCNK3O14649 394 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
TSC2-206ENST00000439117 SCNN1DP51172 638 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 KCNJ12Q14500 433 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 LIN9Q5TKA1 542 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 RUNDC3BQ96NL0 473 aa16.44■□□□□ 0.22
TSC2-206ENST00000439117 MORC2Q9Y6X9 1032 aaPredicted RBP16.44■□□□□ 0.22
TSC2-206ENST00000439117 TULP4Q9NRJ4 1543 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 ALS2CLQ60I27 953 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 HIBCHQ6NVY1 386 aaPredicted RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 TNS3Q68CZ2 1445 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 PRKG1Q13976 671 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 TTC19Q6DKK2 380 aaPredicted RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 TSC22D3Q99576 134 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 GUCY2DQ02846 1103 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 PTPN12Q05209 780 aaKnown RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 FAM207AQ9NSI2 230 aaPredicted RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 AGTPBP1Q9UPW5 1226 aa16.43■□□□□ 0.22
TSC2-206ENST00000439117 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 REXO1Q8N1G1 1221 aaKnown RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 CNOT10Q9H9A5 744 aaKnown RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 NOP53Q9NZM5 478 aaKnown RBP16.43■□□□□ 0.22
TSC2-206ENST00000439117 DTNBO60941 627 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 DNAJC8O75937 253 aaPredicted RBP16.42■□□□□ 0.22
TSC2-206ENST00000439117 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
TSC2-206ENST00000439117 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 PSMD1Q99460 953 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.42■□□□□ 0.224e-9■■■■□ 22.8
TSC2-206ENST00000439117 TNKSO95271 1327 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 CHMP2AO43633 222 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 CUL4AQ13619 759 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 LRWD1Q9UFC0 647 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 ATP8A2Q9NTI2 1148 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 POLE2P56282 527 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 NSMFQ6X4W1 530 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 FANCBQ8NB91 859 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 PDLIM2Q96JY6 352 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 RNF14Q9UBS8 474 aa16.42■□□□□ 0.22
TSC2-206ENST00000439117 ATP10DQ9P241 1426 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
TSC2-206ENST00000439117 USH1GQ495M9 461 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 MGEA5O60502 916 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 CLEC4GQ6UXB4 293 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 CCDC13Q8IYE1 715 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 PNMA1Q8ND90 353 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 NCAPGQ9BPX3 1015 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 CROCC2H7BZ55 1655 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 PFKFB2O60825 505 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 CFBP00751 764 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
TSC2-206ENST00000439117 TYW1Q9NV66 732 aaKnown RBP16.41■□□□□ 0.22
TSC2-206ENST00000439117 PCDHA7Q9UN72 937 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 GNA14O95837 355 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 MORC3Q14149 939 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 LSG1Q9H089 658 aaKnown RBP16.41■□□□□ 0.22
TSC2-206ENST00000439117 VPS37BQ9H9H4 285 aa16.41■□□□□ 0.22
TSC2-206ENST00000439117 H7C1W4 665 aa16.4■□□□□ 0.22
TSC2-206ENST00000439117 IRX5P78411 483 aaPredicted RBP16.4■□□□□ 0.22
TSC2-206ENST00000439117 ATP2A3Q93084 1043 aa16.4■□□□□ 0.22
TSC2-206ENST00000439117 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
TSC2-206ENST00000439117 DKC1O60832 514 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■■■□□ 18.5
TSC2-206ENST00000439117 TBC1D8O95759 1140 aa16.4■□□□□ 0.22
TSC2-206ENST00000439117 MYCLP12524 364 aaPredicted RBP16.4■□□□□ 0.22
TSC2-206ENST00000439117 SNX29Q8TEQ0 813 aa16.4■□□□□ 0.22
TSC2-206ENST00000439117 SRP68Q9UHB9 627 aaKnown RBP16.4■□□□□ 0.22
TSC2-206ENST00000439117 PLEKHA4Q9H4M7 779 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms