RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 RANBP6O60518 1105 aaKnown RBP10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 CLTBP09497 229 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 SDSP20132 328 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 SLC1A4P43007 532 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 ACLYP53396 1101 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 OAZ1P54368 228 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 ACVR2BQ13705 512 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 KCNA10Q16322 511 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 C1orf53Q5VUE5 145 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 MAMDC4Q6UXC1 1216 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 NOL8Q76FK4 1167 aaKnown RBP10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 FAM160B2Q86V87 743 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 SPC25Q9HBM1 224 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 STARD7Q9NQZ5 370 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 TMEM39AQ9NV64 488 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 PLXNA1Q9UIW2 1896 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 GREB1LQ9C091 1923 aaPredicted RBP10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
AC011228.1-201ENST00000439027 SYNRGQ9UMZ2 1314 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 DUSP11O75319 330 aaKnown RBP10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 FDX1P10109 184 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 RAG1P15918 1043 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 STAT2P52630 851 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 SNAP25P60880 206 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 CNTN2Q02246 1040 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 ZNF697Q5TEC3 545 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 FAM109BQ6ICB4 259 aaPredicted RBP10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 KCTD1Q719H9 257 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 ARMCX2Q7L311 632 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 NUP133Q8WUM0 1156 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 RILPL2Q969X0 211 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 GMCL1Q96IK5 515 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 AGBL1Q96MI9 1066 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 ACAD9Q9H845 621 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 TOMM22Q9NS69 142 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 RNF146Q9NTX7 359 aa10.85□□□□□ -0.67
AC011228.1-201ENST00000439027 MYADML2A6NDP7 307 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 MOXD2PA6NHM9 499 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 KIAA0355O15063 1070 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 NMT2O60551 498 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 ALAS1P13196 640 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 CCDC96Q2M329 555 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 RRP12Q5JTH9 1297 aaKnown RBP10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 RCSD1Q6JBY9 416 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 CCDC144CPQ8IYA2 1237 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 KLHDC9Q8NEP7 349 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 EVI5LQ96CN4 794 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 TRERF1Q96PN7 1200 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 ABHD16BQ9H3Z7 469 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 MYO9BQ13459 2157 aa10.84□□□□□ -0.67
AC011228.1-201ENST00000439027 MCM3APO60318 1980 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 ITGB8P26012 769 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 FPGSQ05932 587 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 PCSK9Q8NBP7 692 aaKnown RBP10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 RNPC3Q96LT9 517 aaKnown RBP10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 FGD4Q96M96 766 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 TOX2Q96NM4 488 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 GUCD1Q96NT3 240 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 A1CFQ9NQ94 594 aaKnown RBP10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 IL17RBQ9NRM6 502 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 HELLSQ9NRZ9 838 aa10.83□□□□□ -0.68
AC011228.1-201ENST00000439027 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ASB14A6NK59 587 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 FOXP2O15409 715 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ORC4O43929 436 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ASGR1P07306 291 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 EPHB4P54760 987 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 GJA9P57773 515 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 TNFAIP2Q03169 654 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 FAAP100Q0VG06 881 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ALX1Q15699 326 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 MCMDC2Q4G0Z9 681 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 NSMFQ6X4W1 530 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ANKRD33Q7Z3H0 272 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ZNF710Q8N1W2 664 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 FAM133AQ8N9E0 248 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 FAM227BQ96M60 508 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 AP5M1Q9H0R1 490 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 SEMA6BQ9H3T3 888 aa10.82□□□□□ -0.68
AC011228.1-201ENST00000439027 ANAPC4Q9UJX5 808 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms