RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 KCTD2Q14681 263 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 TKFCQ3LXA3 575 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
SNRPB-202ENST00000438552 ABRAQ8N0Z2 381 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 CCDC82Q8N4S0 544 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 TBC1D32Q96NH3 1257 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 LZTS2Q9BRK4 669 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 FAM217BQ9NTX9 383 aaPredicted RBP18.75■□□□□ 0.59
SNRPB-202ENST00000438552 FBXO40Q9UH90 709 aa18.75■□□□□ 0.59
SNRPB-202ENST00000438552 NFIBO00712 420 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 ZBTB5O15062 677 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 ADCY3O60266 1144 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 PGK2P07205 417 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 PDIA3P30101 505 aaKnown RBP18.74■□□□□ 0.59
SNRPB-202ENST00000438552 SLC9C1Q4G0N8 1177 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■□□□ 12.2
SNRPB-202ENST00000438552 FBXO11Q86XK2 927 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 SH3TC2Q8TF17 1288 aa18.74■□□□□ 0.59
SNRPB-202ENST00000438552 NCOA5Q9HCD5 579 aaKnown RBP18.74■□□□□ 0.59
SNRPB-202ENST00000438552 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 COBLO75128 1261 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 GRK4P32298 578 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 ADD1P35611 737 aaKnown RBP18.73■□□□□ 0.59
SNRPB-202ENST00000438552 CCT2P78371 535 aaKnown RBP18.73■□□□□ 0.59
SNRPB-202ENST00000438552 STK3Q13188 491 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 CCL14Q16627 93 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 ANKRD35Q8N283 1001 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 SLAIN1Q8ND83 568 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 NPLOC4Q8TAT6 608 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 TRIB2Q92519 343 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 RRP36Q96EU6 259 aaKnown RBP18.73■□□□□ 0.59
SNRPB-202ENST00000438552 AMNQ9BXJ7 453 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 ALDH8A1Q9H2A2 487 aaPredicted RBP18.73■□□□□ 0.59
SNRPB-202ENST00000438552 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
SNRPB-202ENST00000438552 LRRC37A2A6NM11 1700 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 MCM3APO60318 1980 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 ABCB11O95342 1321 aa18.73■□□□□ 0.59
SNRPB-202ENST00000438552 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 SMARCA1P28370 1054 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 FUT2Q10981 343 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 NSMFQ6X4W1 530 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 DPP9Q86TI2 863 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 CLEC4DQ8WXI8 215 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 TPCN1Q9ULQ1 816 aa18.72■□□□□ 0.59
SNRPB-202ENST00000438552 LARGE1O95461 756 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 HOXC6P09630 235 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 XRCC5P13010 732 aaKnown RBP18.71■□□□□ 0.59
SNRPB-202ENST00000438552 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 SLC30A10Q6XR72 485 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 DDX11Q96FC9 970 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 ZNF274Q96GC6 653 aaPredicted RBP18.71■□□□□ 0.59
SNRPB-202ENST00000438552 FLRT1Q9NZU1 646 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 SEC63Q9UGP8 760 aaKnown RBP18.71■□□□□ 0.59
SNRPB-202ENST00000438552 PFASO15067 1338 aa18.71■□□□□ 0.59
SNRPB-202ENST00000438552 DNAJC25-GNG10A0A024R161 153 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 CCDC196A0A1B0GTZ2 297 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 TRIM32Q13049 653 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 PXYLP1Q8TE99 480 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 ABHD8Q96I13 439 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 CYP39A1Q9NYL5 469 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 PCDHA1Q9Y5I3 950 aa18.7■□□□□ 0.58
SNRPB-202ENST00000438552 PTPDC1A2A3K4 754 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 OPLAHO14841 1288 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 PPFIA3O75145 1194 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 HMGCRP04035 888 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 INHAP05111 366 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 CNTN2Q02246 1040 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 RABEP1Q15276 862 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 ZNF792Q3KQV3 632 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 ARMC5Q96C12 935 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 MAML3Q96JK9 1138 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 FGD4Q96M96 766 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 SLC5A4Q9NY91 659 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 BIN2Q9UBW5 565 aaPredicted RBP18.69■□□□□ 0.58
SNRPB-202ENST00000438552 MRPL11Q9Y3B7 192 aaKnown RBP18.69■□□□□ 0.58
SNRPB-202ENST00000438552 FRMPD3Q5JV73 1810 aa18.69■□□□□ 0.58
SNRPB-202ENST00000438552 POTEB2H3BUK9 544 aa18.68■□□□□ 0.58
SNRPB-202ENST00000438552 MYCP01106 439 aaPredicted RBP18.68■□□□□ 0.58
SNRPB-202ENST00000438552 BAATQ14032 418 aaPredicted RBP18.68■□□□□ 0.58
SNRPB-202ENST00000438552 GPKOWQ92917 476 aaPredicted RBP eCLIP18.68■□□□□ 0.58
SNRPB-202ENST00000438552 PHKBQ93100 1093 aa18.68■□□□□ 0.58
SNRPB-202ENST00000438552 ZNF333Q96JL9 665 aa18.68■□□□□ 0.58
SNRPB-202ENST00000438552 PFKFB2O60825 505 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 CALML3P27482 149 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 SCRN1Q12765 414 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 NTRK3Q16288 839 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 RNF207Q6ZRF8 634 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 HEATR3Q7Z4Q2 680 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 TRMT44Q8IYL2 757 aaKnown RBP18.67■□□□□ 0.58
SNRPB-202ENST00000438552 FAM133AQ8N9E0 248 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 TBC1D5Q92609 795 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 PURBQ96QR8 312 aaKnown RBP18.67■□□□□ 0.58
SNRPB-202ENST00000438552 SLKQ9H2G2 1235 aaPredicted RBP18.67■□□□□ 0.58
SNRPB-202ENST00000438552 V9GY48 417 aaPredicted RBP18.67■□□□□ 0.58
SNRPB-202ENST00000438552 ASTN1O14525 1302 aa18.67■□□□□ 0.58
SNRPB-202ENST00000438552 IFNAR1P17181 557 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 CYP2C19P33261 490 aa18.66■□□□□ 0.58
SNRPB-202ENST00000438552 RPS6P62753 249 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms