RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 JAK2O60674 1132 aa21.21■□□□□ 0.99
HDAC6-208ENST00000438518 PPP1R11O60927 126 aaPredicted RBP21.21■□□□□ 0.99
HDAC6-208ENST00000438518 FDPSP14324 419 aaKnown RBP21.21■□□□□ 0.99
HDAC6-208ENST00000438518 SNAP25P60880 206 aa21.21■□□□□ 0.99
HDAC6-208ENST00000438518 HEATR3Q7Z4Q2 680 aa21.21■□□□□ 0.99
HDAC6-208ENST00000438518 MCF2L2Q86YR7 1114 aa21.21■□□□□ 0.99
HDAC6-208ENST00000438518 ACAD9Q9H845 621 aa21.21■□□□□ 0.99
HDAC6-208ENST00000438518 MAP3K20Q9NYL2 800 aaKnown RBP21.21■□□□□ 0.99
HDAC6-208ENST00000438518 RBM19Q9Y4C8 960 aaKnown RBP21.21■□□□□ 0.99
HDAC6-208ENST00000438518 ESYT2A0FGR8 921 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 ALAS1P13196 640 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 PDIA4P13667 645 aaKnown RBP21.2■□□□□ 0.98
HDAC6-208ENST00000438518 Q3C1V9 767 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 USH1GQ495M9 461 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 WWC2Q6AWC2 1192 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 PIBF1Q8WXW3 757 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 TRERF1Q96PN7 1200 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 RNF146Q9NTX7 359 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 PLXNB2O15031 1838 aa21.2■□□□□ 0.98
HDAC6-208ENST00000438518 hCG_1642624A0A1W2PR95 340 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 STXBP3O00186 592 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 STRNO43815 780 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 TBC1D8O95759 1140 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 ERCC3P19447 782 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 NAPAP54920 295 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 SP3Q02447 781 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 GHRHRQ02643 423 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 TRIM29Q14134 588 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 KIF22Q14807 665 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 GALNT17Q6IS24 598 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 NCAPG2Q86XI2 1143 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 ABRAQ8N0Z2 381 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 DDX11Q96FC9 970 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 ALG1Q9BT22 464 aa21.19■□□□□ 0.98
HDAC6-208ENST00000438518 GPR25O00155 361 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 PDCP20941 246 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 GJB2P29033 226 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 GNA11P29992 359 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 ARHGEF6Q15052 776 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 RIPK3Q9Y572 518 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 IVNS1ABPQ9Y6Y0 642 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 PFASO15067 1338 aa21.18■□□□□ 0.98
HDAC6-208ENST00000438518 CALML3P27482 149 aa21.17■□□□□ 0.98
HDAC6-208ENST00000438518 LACTBP83111 547 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-208ENST00000438518 MCTP2Q6DN12 878 aa21.17■□□□□ 0.98
HDAC6-208ENST00000438518 BICD2Q8TD16 824 aa21.17■□□□□ 0.98
HDAC6-208ENST00000438518 GPKOWQ92917 476 aaPredicted RBP eCLIP21.17■□□□□ 0.98
HDAC6-208ENST00000438518 COA7Q96BR5 231 aa21.17■□□□□ 0.98
HDAC6-208ENST00000438518 ZMYND12Q9H0C1 365 aa21.17■□□□□ 0.98
HDAC6-208ENST00000438518 CWC22Q9HCG8 908 aaKnown RBP21.17■□□□□ 0.98
HDAC6-208ENST00000438518 C6orf50Q9HD87 102 aa21.17■□□□□ 0.98
HDAC6-208ENST00000438518 DAXXQ9UER7 740 aaPredicted RBP21.17■□□□□ 0.98
HDAC6-208ENST00000438518 PPFIA3O75145 1194 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 GNRH1P01148 92 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 MRPL12P52815 198 aaKnown RBP21.16■□□□□ 0.98
HDAC6-208ENST00000438518 FCGRTP55899 365 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 CLEC4DQ8WXI8 215 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 CUL5Q93034 780 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 ERO1AQ96HE7 468 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 PORCNQ9H237 461 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 R3HDMLQ9H3Y0 253 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 SMCHD1A6NHR9 2005 aa21.16■□□□□ 0.98
HDAC6-208ENST00000438518 PIK3CDO00329 1044 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 FKTNO75072 461 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 FCER1AP12319 257 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 SLC4A3P48751 1232 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 KCTD2Q14681 263 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 GPR142Q7Z601 462 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 PLEKHH3Q7Z736 793 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 C8orf76Q96K31 380 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 PSTPIP2Q9H939 334 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 EFCC1Q9HA90 598 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 BRMS1Q9HCU9 246 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 RIC8AQ9NPQ8 531 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 HOMER2Q9NSB8 354 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 VPS54Q9P1Q0 977 aa21.15■□□□□ 0.98
HDAC6-208ENST00000438518 SMCO2A6NFE2 343 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 PEX10O60683 326 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 HSD17B4P51659 736 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 ADCY7P51828 1080 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 NLRP5P59047 1200 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 MUM1L1Q5H9M0 696 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 RNF207Q6ZRF8 634 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 ANKRD35Q8N283 1001 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 DAGLBQ8NCG7 672 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 SOCS4Q8WXH5 440 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 MMP19Q99542 508 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 PHF20Q9BVI0 1012 aa21.14■□□□□ 0.97
HDAC6-208ENST00000438518 CEP350Q5VT06 3117 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 GCOM1H8Y6P7 765 aaPredicted RBP21.13■□□□□ 0.97
HDAC6-208ENST00000438518 NFIBO00712 420 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 TNPO2O14787 897 aaKnown RBP21.13■□□□□ 0.97
HDAC6-208ENST00000438518 POLR2MP0CAP2 368 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 PTPREP23469 700 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 GRB14Q14449 540 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 WDR78Q5VTH9 848 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 TYW1BQ6NUM6 668 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 FBXO18Q8NFZ0 1043 aa21.13■□□□□ 0.97
HDAC6-208ENST00000438518 A1CFQ9NQ94 594 aaKnown RBP21.13■□□□□ 0.97
HDAC6-208ENST00000438518 PCDHA4Q9UN74 947 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms