RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 IGHA2P01877 340 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 TFRCP02786 760 aaKnown RBP19.02■□□□□ 0.64
CTSD-205ENST00000438213 EN2P19622 333 aaPredicted RBP19.02■□□□□ 0.64
CTSD-205ENST00000438213 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.64
CTSD-205ENST00000438213 QRICH1Q2TAL8 776 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 USH1GQ495M9 461 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 ZNF467Q7Z7K2 595 aaPredicted RBP19.02■□□□□ 0.64
CTSD-205ENST00000438213 FANCBQ8NB91 859 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 U2AF1L4Q8WU68 220 aaKnown RBP19.02■□□□□ 0.64
CTSD-205ENST00000438213 DEFB118Q96PH6 123 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 AMNQ9BXJ7 453 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 MAF1Q9H063 256 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 MRPL11Q9Y3B7 192 aaKnown RBP19.02■□□□□ 0.64
CTSD-205ENST00000438213 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.63
CTSD-205ENST00000438213 ABCB11O95342 1321 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 RPS6KB1P23443 525 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 CNGA1P29973 690 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 RGS22Q8NE09 1264 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 MTMR8Q96EF0 704 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 TM6SF1Q9BZW5 370 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 CYP39A1Q9NYL5 469 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 NRBP1Q9UHY1 535 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 CYP46A1Q9Y6A2 500 aa19.01■□□□□ 0.63
CTSD-205ENST00000438213 PNMA6FA0A0J9YX94 578 aa19■□□□□ 0.63
CTSD-205ENST00000438213 PTPDC1A2A3K4 754 aa19■□□□□ 0.63
CTSD-205ENST00000438213 CPA1P15085 419 aa19■□□□□ 0.63
CTSD-205ENST00000438213 BAATQ14032 418 aaPredicted RBP19■□□□□ 0.63
CTSD-205ENST00000438213 APOA5Q6Q788 366 aa19■□□□□ 0.63
CTSD-205ENST00000438213 MAMDC4Q6UXC1 1216 aa19■□□□□ 0.63
CTSD-205ENST00000438213 Q6ZUG5 572 aa19■□□□□ 0.63
CTSD-205ENST00000438213 RUFY3Q7L099 469 aa19■□□□□ 0.63
CTSD-205ENST00000438213 MCF2L2Q86YR7 1114 aa19■□□□□ 0.63
CTSD-205ENST00000438213 FBXL16Q8N461 479 aa19■□□□□ 0.63
CTSD-205ENST00000438213 FAM133AQ8N9E0 248 aa19■□□□□ 0.63
CTSD-205ENST00000438213 CLEC4DQ8WXI8 215 aa19■□□□□ 0.63
CTSD-205ENST00000438213 ZSWIM6Q9HCJ5 1215 aa19■□□□□ 0.63
CTSD-205ENST00000438213 CNPY2Q9Y2B0 182 aa19■□□□□ 0.63
CTSD-205ENST00000438213 ASB14A6NK59 587 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 NFIBO00712 420 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 ZBTB43O43298 467 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 MSCO60682 206 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 CCND3P30281 292 aaPredicted RBP18.99■□□□□ 0.63
CTSD-205ENST00000438213 ANAPC15P60006 121 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 CNTN2Q02246 1040 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 PPP2R5BQ15173 497 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 RNF207Q6ZRF8 634 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 MICU3Q86XE3 530 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 HOMER1Q86YM7 354 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 CCDC144CPQ8IYA2 1237 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 RRP36Q96EU6 259 aaKnown RBP18.99■□□□□ 0.63
CTSD-205ENST00000438213 PIGSQ96S52 555 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 SPZ1Q9BXG8 430 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 RBM28Q9NW13 759 aaKnown RBP18.99■□□□□ 0.63
CTSD-205ENST00000438213 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
CTSD-205ENST00000438213 NAP1L2Q9ULW6 460 aaPredicted RBP18.99■□□□□ 0.63
CTSD-205ENST00000438213 SYNGAP1Q96PV0 1343 aa18.99■□□□□ 0.63
CTSD-205ENST00000438213 KLF18A0A0U1RQI7 1052 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 CYTH3O43739 400 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 CYBAP13498 195 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 TAL1P17542 331 aaPredicted RBP18.98■□□□□ 0.63
CTSD-205ENST00000438213 RXRAP19793 462 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 RCAN1P53805 252 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 MLLT1Q03111 559 aaPredicted RBP18.98■□□□□ 0.63
CTSD-205ENST00000438213 PRAMEF19Q5SWL8 479 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 BRPF3Q9ULD4 1205 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 PCDHA1Q9Y5I3 950 aa18.98■□□□□ 0.63
CTSD-205ENST00000438213 CCDC196A0A1B0GTZ2 297 aa18.97■□□□□ 0.63
CTSD-205ENST00000438213 RAB11FIP4Q86YS3 637 aa18.97■□□□□ 0.63
CTSD-205ENST00000438213 SRBD1Q8N5C6 995 aaKnown RBP18.97■□□□□ 0.63
CTSD-205ENST00000438213 BRF1Q92994 677 aa18.97■□□□□ 0.63
CTSD-205ENST00000438213 MPHOSPH6Q99547 160 aaKnown RBP18.97■□□□□ 0.63
CTSD-205ENST00000438213 CRISPLD2Q9H0B8 497 aa18.97■□□□□ 0.63
CTSD-205ENST00000438213 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
CTSD-205ENST00000438213 SMCHD1A6NHR9 2005 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 BAZ2BQ9UIF8 2168 aaKnown RBP18.96■□□□□ 0.63
CTSD-205ENST00000438213 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 SOWAHBA6NEL2 793 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 B4DLN1 442 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 SEPT4O43236 478 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 CALML3P27482 149 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 MRPL12P52815 198 aaKnown RBP18.96■□□□□ 0.63
CTSD-205ENST00000438213 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
CTSD-205ENST00000438213 APOBRQ0VD83 1088 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
CTSD-205ENST00000438213 RTN1Q16799 776 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 SLC35G1Q2M3R5 365 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 SAMD3Q8N6K7 520 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 TRPV1Q8NER1 839 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 PIBF1Q8WXW3 757 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 AGXT2Q9BYV1 514 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 ABHD16BQ9H3Z7 469 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 DDX20Q9UHI6 824 aaKnown RBP18.96■□□□□ 0.63
CTSD-205ENST00000438213 CENPFP49454 3210 aa18.96■□□□□ 0.63
CTSD-205ENST00000438213 GOLGA8AA7E2F4 631 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 GOLGA8BA8MQT2 603 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 PLEKHA8P1O95397 391 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 SNAI1O95863 264 aaPredicted RBP18.95■□□□□ 0.62
CTSD-205ENST00000438213 LHX8Q68G74 356 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 TMTC3Q6ZXV5 915 aa18.95■□□□□ 0.62
CTSD-205ENST00000438213 ARMCX2Q7L311 632 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms