RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 B4E1Z4 1266 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 ADAMTS4O75173 837 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 SNAI1O95863 264 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-204ENST00000436439 TTLL1O95922 423 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 RARBP10826 455 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 IRX5P78411 483 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-204ENST00000436439 Q6ZUG5 572 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 ESR2Q92731 530 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 TRIM43Q96BQ3 446 aaPredicted RBP12.76□□□□□ -0.37
HMGCL-204ENST00000436439 CHMP4CQ96CF2 233 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 TMEM87BQ96K49 555 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 FGD4Q96M96 766 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 PRKAG2Q9UGJ0 569 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
HMGCL-204ENST00000436439 ADCY6O43306 1168 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 PRC1O43663 620 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 TSPY3P0CV98 308 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 TSPY8P0CW00 308 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 AKR1A1P14550 325 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 ITGB8P26012 769 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 ANTXR2P58335 489 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 TFAP4Q01664 338 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 C9orf50Q5SZB4 431 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 CYB5R4Q7L1T6 521 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 BADQ92934 168 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 INTS4Q96HW7 963 aaKnown RBP12.75□□□□□ -0.37
HMGCL-204ENST00000436439 ZSWIM5Q9P217 1185 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
HMGCL-204ENST00000436439 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 A0A1W2PQ45 241 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-204ENST00000436439 A0A1W2PQY0 241 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 ZBED4O75132 1171 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 KDM4AO75164 1064 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 BMP3P12645 472 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 LIFRP42702 1097 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 TLE2Q04725 743 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 SHHQ15465 462 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
HMGCL-204ENST00000436439 RNF180Q86T96 592 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 IGDCC4Q8TDY8 1250 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 SLKQ9H2G2 1235 aaPredicted RBP12.74□□□□□ -0.37
HMGCL-204ENST00000436439 CHMP5Q9NZZ3 219 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 TPCN1Q9ULQ1 816 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
HMGCL-204ENST00000436439 ZNF536O15090 1300 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 MYADML2A6NDP7 307 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 NMT2O60551 498 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 MSL3Q8N5Y2 521 aaKnown RBP12.73□□□□□ -0.37
HMGCL-204ENST00000436439 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-204ENST00000436439 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 HOMER2Q9NSB8 354 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
HMGCL-204ENST00000436439 SYNPO2Q9UMS6 1093 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
HMGCL-204ENST00000436439 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 FGD1P98174 961 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 SART3Q15020 963 aaKnown RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 ME3Q16798 604 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 CCSAPQ6IQ19 270 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 CHST3Q7LGC8 479 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 KLHDC9Q8NEP7 349 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 BRF1Q92994 677 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 GUCD1Q96NT3 240 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 TCP11L1Q9NUJ3 509 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 FAM184BQ9ULE4 1060 aa12.72□□□□□ -0.37
HMGCL-204ENST00000436439 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-204ENST00000436439 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.37
HMGCL-204ENST00000436439 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
HMGCL-204ENST00000436439 CLTBP09497 229 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 DDIT3P35638 169 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 STAT2P52630 851 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 ACLYP53396 1101 aa12.71□□□□□ -0.37
HMGCL-204ENST00000436439 RCAN1P53805 252 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms