RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 EDAQ92838 391 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
CPNE1-214ENST00000435747 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 SNRKQ9NRH2 765 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 GRIN2DO15399 1336 aa12.58□□□□□ -0.4
CPNE1-214ENST00000435747 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-214ENST00000435747 ATRXP46100 2492 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 ZEB2O60315 1214 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 SUPT20HL2P0C7V6 817 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 CYP2C9P11712 490 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 SHMT1P34896 483 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 ZAP70P43403 619 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 ERVK-21P61565 698 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-214ENST00000435747 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
CPNE1-214ENST00000435747 CCDC8Q9H0W5 538 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-214ENST00000435747 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
CPNE1-214ENST00000435747 RCAN3Q9UKA8 241 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 EXOC6BQ9Y2D4 811 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
CPNE1-214ENST00000435747 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-214ENST00000435747 SOWAHBA6NEL2 793 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
CPNE1-214ENST00000435747 BAIAP3O94812 1187 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 PSMC6P62333 389 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 DYNLL1P63167 89 aaKnown RBP12.56□□□□□ -0.4
CPNE1-214ENST00000435747 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-214ENST00000435747 FSCN1Q16658 493 aaKnown RBP12.56□□□□□ -0.4
CPNE1-214ENST00000435747 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 RNF135Q8IUD6 432 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 ALDH8A1Q9H2A2 487 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-214ENST00000435747 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 ADAMTS5Q9UNA0 930 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 ZNF292O60281 2723 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 CHD6Q8TD26 2715 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 MYH8P13535 1937 aa12.56□□□□□ -0.4
CPNE1-214ENST00000435747 MS4A1P11836 297 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 TNFAIP2Q03169 654 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 TIGD5Q53EQ6 642 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 TLK2Q86UE8 772 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 RPAP2Q8IXW5 612 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-214ENST00000435747 FBXL6Q8N531 539 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 MAGEB6Q8N7X4 407 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 PABPC5Q96DU9 382 aaKnown RBP12.55□□□□□ -0.4
CPNE1-214ENST00000435747 AP5M1Q9H0R1 490 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 ARHGEF10LQ9HCE6 1279 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
CPNE1-214ENST00000435747 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 ZNF214Q9UL59 606 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-214ENST00000435747 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 TNKSO95271 1327 aa12.55□□□□□ -0.4
CPNE1-214ENST00000435747 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 VWA5AO00534 786 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 PTPROQ16827 1216 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 TMCO2Q7Z6W1 182 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-214ENST00000435747 ERC1Q8IUD2 1116 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 RHPN1Q8TCX5 695 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 MRPL38Q96DV4 380 aaKnown RBP12.54□□□□□ -0.4
CPNE1-214ENST00000435747 CRBNQ96SW2 442 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 ANTXR1Q9H6X2 564 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 FBXO28Q9NVF7 368 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 ASTN1O14525 1302 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 SPTBN2O15020 2390 aa12.54□□□□□ -0.4
CPNE1-214ENST00000435747 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-214ENST00000435747 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 H0Y858 1186 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 IQCF3P0C7M6 154 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 PLCD1P51178 756 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
CPNE1-214ENST00000435747 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 RAD9AQ99638 391 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
CPNE1-214ENST00000435747 TLR9Q9NR96 1032 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 PPP1R9AQ9ULJ8 1098 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 DNAH14Q0VDD8 3507 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 DMXL1Q9Y485 3027 aa12.53□□□□□ -0.4
CPNE1-214ENST00000435747 CEP250Q9BV73 2442 aa12.52□□□□□ -0.4
CPNE1-214ENST00000435747 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-214ENST00000435747 POLR3DP05423 398 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-214ENST00000435747 CYP7A1P22680 504 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 VCPP55072 806 aaKnown RBP12.52□□□□□ -0.41
CPNE1-214ENST00000435747 SMAD2Q15796 467 aaKnown RBP12.52□□□□□ -0.41
CPNE1-214ENST00000435747 SNRNP48Q6IEG0 339 aaKnown RBP12.52□□□□□ -0.41
CPNE1-214ENST00000435747 AACSQ86V21 672 aa12.52□□□□□ -0.41
CPNE1-214ENST00000435747 CERS3Q8IU89 383 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms