RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ZNF287Q9HBT7 754 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 DISC1Q9NRI5 854 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 BARHL2Q9NY43 387 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 MEIS1O00470 390 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 ENC1O14682 589 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 SLC37A4O43826 429 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 HOXA13P31271 388 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-203ENST00000434376 CASQ1P31415 396 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 PTPROQ16827 1216 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 ANKRD20A12PQ8NF67 263 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 CHP1Q99653 195 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 BBOX1O75936 387 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 TPM1P09493 284 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 GNAQP50148 359 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 ETF1P62495 437 aaKnown RBP17.47■□□□□ 0.39
SCARF1-203ENST00000434376 STK4Q13043 487 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 RAD9BQ6WBX8 426 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 CSGALNACT2Q8N6G5 542 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-203ENST00000434376 C21orf2O43822 256 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 STAT3P40763 770 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 SEPT2Q15019 361 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-203ENST00000434376 BPIFA3Q9BQP9 254 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 CRACR2AQ9BSW2 395 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 EXOC1Q9NV70 894 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
SCARF1-203ENST00000434376 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
SCARF1-203ENST00000434376 FANCGO15287 622 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 SLC1A4P43007 532 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 LMAN1P49257 510 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 CDC42EP5Q6NZY7 148 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 SNX29Q8TEQ0 813 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 BMP2KQ9NSY1 1161 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-203ENST00000434376 MAGEC2Q9UBF1 373 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-203ENST00000434376 FHOD1Q9Y613 1164 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 GPR75-ASB3A0A0A6YYF3 556 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 OR52Z1P0C646 297 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 PDHBP11177 359 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 TRIM21P19474 475 aaKnown RBP17.46■□□□□ 0.39
SCARF1-203ENST00000434376 SARSP49591 514 aaKnown RBP17.46■□□□□ 0.39
SCARF1-203ENST00000434376 NEK8Q86SG6 692 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 C10orf67Q8IYJ2 551 aa17.46■□□□□ 0.39
SCARF1-203ENST00000434376 FAM207AQ9NSI2 230 aaPredicted RBP17.46■□□□□ 0.39
SCARF1-203ENST00000434376 KRT18P05783 430 aaKnown RBP17.46■□□□□ 0.38
SCARF1-203ENST00000434376 CALCRLQ16602 461 aa17.46■□□□□ 0.38
SCARF1-203ENST00000434376 CCDC155Q8N6L0 562 aa17.46■□□□□ 0.38
SCARF1-203ENST00000434376 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
SCARF1-203ENST00000434376 CHMP2AO43633 222 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 ZNF579Q8NAF0 562 aaKnown RBP17.45■□□□□ 0.38
SCARF1-203ENST00000434376 CAPZA3Q96KX2 299 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 GDAP1L1Q96MZ0 367 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 NPHP3-ACAD11A0A0J9YXS1 232 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 OAS2P29728 719 aaKnown RBP17.45■□□□□ 0.38
SCARF1-203ENST00000434376 PLA2G4AP47712 749 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 CYP27A1Q02318 531 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 NAALADL2Q58DX5 795 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 ADGRF4Q8IZF3 695 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 TEKT1Q969V4 418 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
SCARF1-203ENST00000434376 COPB1P53618 953 aaKnown RBP17.44■□□□□ 0.38
SCARF1-203ENST00000434376 PDXDC2PQ6P474 469 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 NEDD1Q8NHV4 660 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 MTMR4Q9NYA4 1195 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 PALM3A6NDB9 673 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-203ENST00000434376 GTPBP6O43824 516 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-203ENST00000434376 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 RHOXF2BP0C7M4 288 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 RHOXF2Q9BQY4 288 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 MMRN2Q9H8L6 949 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.44■□□□□ 0.385e-8■■■■■ 167.7
SCARF1-203ENST00000434376 ARHGAP6O43182 974 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 ZNF18P17022 549 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 GNA11P29992 359 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 PPARDQ03181 441 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
SCARF1-203ENST00000434376 ZSCAN12O43309 604 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 BMP15O95972 392 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 ADCY7P51828 1080 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 CRKP46108 304 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-203ENST00000434376 NR1I3Q14994 352 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 TSR1Q2NL82 804 aaKnown RBP17.43■□□□□ 0.38
SCARF1-203ENST00000434376 REXO1L1PQ8IX06 675 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 CALML4Q96GE6 196 aa17.43■□□□□ 0.38
SCARF1-203ENST00000434376 GYPCP04921 128 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 PLCG2P16885 1265 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 E2F4Q16254 413 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 MAEAQ7L5Y9 396 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 SH2D3AQ9BRG2 576 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 MACROD2A1Z1Q3 448 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 PSMA7O14818 248 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 FGRP09769 529 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms