RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 SHISA4Q96DD7 197 aa17.61■□□□□ 0.41
RBM39-213ENST00000433027 GJB4Q9NTQ9 266 aa17.61■□□□□ 0.41
RBM39-213ENST00000433027 FBXO28Q9NVF7 368 aa17.61■□□□□ 0.41
RBM39-213ENST00000433027 RABGAP1Q9Y3P9 1069 aa17.61■□□□□ 0.41
RBM39-213ENST00000433027 TLL2Q9Y6L7 1015 aa17.61■□□□□ 0.41
RBM39-213ENST00000433027 TESPA1A2RU30 521 aaPredicted RBP17.6■□□□□ 0.41
RBM39-213ENST00000433027 KIF28PB7ZC32 967 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 CLK2P49760 499 aaKnown RBP17.6■□□□□ 0.41
RBM39-213ENST00000433027 FOSBP53539 338 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 JMYQ8N9B5 988 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 KCNG4Q8TDN1 519 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 COA7Q96BR5 231 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 MS4A4AQ96JQ5 239 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 EHMT1Q9H9B1 1298 aa17.6■□□□□ 0.41
RBM39-213ENST00000433027 A0A0G2JMZ2 1700 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 ZNF536O15090 1300 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 MANSC4A6NHS7 340 aaPredicted RBP17.59■□□□□ 0.41
RBM39-213ENST00000433027 SPDYE16A6NNV3 312 aaPredicted RBP17.59■□□□□ 0.41
RBM39-213ENST00000433027 DTNBO60941 627 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 DNM1Q05193 864 aaKnown RBP17.59■□□□□ 0.41
RBM39-213ENST00000433027 MOGSQ13724 837 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
RBM39-213ENST00000433027 FOXD4L5Q5VV16 416 aaPredicted RBP17.59■□□□□ 0.41
RBM39-213ENST00000433027 RGMBQ6NW40 437 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
RBM39-213ENST00000433027 REPS2Q8NFH8 660 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 FOXD4L4Q8WXT5 416 aaPredicted RBP17.59■□□□□ 0.41
RBM39-213ENST00000433027 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.59■□□□□ 0.41
RBM39-213ENST00000433027 RCOR1Q9UKL0 485 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 PCDHA6Q9UN73 950 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 PCDHA8Q9Y5H6 950 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 TCHHQ07283 1943 aa17.59■□□□□ 0.41
RBM39-213ENST00000433027 TMEM88BA6NKF7 163 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 LAD1O00515 517 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 GJA5P36382 358 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 NR5A1Q13285 461 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 NFKBIBQ15653 356 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.4
RBM39-213ENST00000433027 ANO1Q5XXA6 986 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
RBM39-213ENST00000433027 CHST13Q8NET6 341 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 ATG4CQ96DT6 458 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 FBXO40Q9UH90 709 aa17.58■□□□□ 0.4
RBM39-213ENST00000433027 GCOM1H8Y6P7 765 aaPredicted RBP17.57■□□□□ 0.4
RBM39-213ENST00000433027 PPP6R2O75170 966 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 SLC25A27O95847 323 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 POLR2MP0CAP2 368 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 GCFC2P16383 781 aaKnown RBP17.57■□□□□ 0.4
RBM39-213ENST00000433027 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
RBM39-213ENST00000433027 GCLCP48506 637 aaPredicted RBP17.57■□□□□ 0.4
RBM39-213ENST00000433027 FMR1Q06787 632 aaKnown RBP eCLIP17.57■□□□□ 0.4
RBM39-213ENST00000433027 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 GPAT2Q6NUI2 795 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 MOXD1Q6UVY6 613 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
RBM39-213ENST00000433027 ASCC2Q9H1I8 757 aaPredicted RBP17.57■□□□□ 0.4
RBM39-213ENST00000433027 ZNF214Q9UL59 606 aaPredicted RBP17.57■□□□□ 0.4
RBM39-213ENST00000433027 CCL15-CCL14A0A0B4J2E2 113 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 SLC10A3P09131 477 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 USP11P51784 963 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 ZNF157P51786 506 aaPredicted RBP17.56■□□□□ 0.4
RBM39-213ENST00000433027 HERVK_113P62684 666 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 SLC39A14Q15043 492 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 CCL15Q16663 113 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 CCDC174Q6PII3 467 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 PIK3AP1Q6ZUJ8 805 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 USP28Q96RU2 1077 aa17.56■□□□□ 0.4
RBM39-213ENST00000433027 SPDYE3A6NKU9 549 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 MEIS2O14770 477 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 MBD3O95983 291 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 STAT3P40763 770 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 HSD17B4P51659 736 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 UBE2HP62256 183 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 USH1GQ495M9 461 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 NEK8Q86SG6 692 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 RIOX2Q8IUF8 465 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 LINC00301Q8NCQ3 95 aa17.55■□□□□ 0.4
RBM39-213ENST00000433027 LEO1Q8WVC0 666 aaPredicted RBP17.55■□□□□ 0.4
RBM39-213ENST00000433027 PARK7Q99497 189 aaKnown RBP17.55■□□□□ 0.4
RBM39-213ENST00000433027 RBBP6Q7Z6E9 1792 aaKnown RBP17.54■□□□□ 0.4
RBM39-213ENST00000433027 SREBF2Q12772 1141 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 DGKZQ13574 1117 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 TMEM132BQ14DG7 1078 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 STK38Q15208 465 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 ARL6IP4Q66PJ3 421 aaKnown RBP17.54■□□□□ 0.4
RBM39-213ENST00000433027 PPP4R3AQ6IN85 833 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 SHCBP1Q8NEM2 672 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 ACAD9Q9H845 621 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
RBM39-213ENST00000433027 OPLAHO14841 1288 aa17.53■□□□□ 0.4
RBM39-213ENST00000433027 SPTLC2O15270 562 aa17.53■□□□□ 0.4
RBM39-213ENST00000433027 TOB1P50616 345 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms