RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 SOCS4Q8WXH5 440 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
CSTF3-202ENST00000431742 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 AMNQ9BXJ7 453 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 ACAD9Q9H845 621 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 NCOA5Q9HCD5 579 aaKnown RBP16.68■□□□□ 0.26
CSTF3-202ENST00000431742 GABRQQ9UN88 632 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 ABCB11O95342 1321 aa16.68■□□□□ 0.26
CSTF3-202ENST00000431742 FCER1AP12319 257 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 IFNAR1P17181 557 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 HOXD10P28358 340 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 FLT3LGP49771 235 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
CSTF3-202ENST00000431742 SCRN1Q12765 414 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 IRF5Q13568 498 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 ME3Q16798 604 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 MUM1L1Q5H9M0 696 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 CLEC4DQ8WXI8 215 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 HOMER2Q9NSB8 354 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 PTPN22Q9Y2R2 807 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
CSTF3-202ENST00000431742 DNAJC25-GNG10A0A024R161 153 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 HOXC6P09630 235 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 ADORA2AP29274 412 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 SLC4A3P48751 1232 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 MAP2K5Q13163 448 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 STK3Q13188 491 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
CSTF3-202ENST00000431742 USH1GQ495M9 461 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 NOL8Q76FK4 1167 aaKnown RBP16.66■□□□□ 0.26
CSTF3-202ENST00000431742 CCDC82Q8N4S0 544 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 MMP19Q99542 508 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 NUDT12Q9BQG2 462 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 SLKQ9H2G2 1235 aaPredicted RBP16.66■□□□□ 0.26
CSTF3-202ENST00000431742 CWC22Q9HCG8 908 aaKnown RBP16.66■□□□□ 0.26
CSTF3-202ENST00000431742 LIMCH1Q9UPQ0 1083 aa16.66■□□□□ 0.26
CSTF3-202ENST00000431742 NFIBO00712 420 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 OPLAHO14841 1288 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 ST18O60284 1047 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 CD2BP2O95400 341 aaKnown RBP16.65■□□□□ 0.26
CSTF3-202ENST00000431742 RGS2P41220 211 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 TRAF1Q13077 416 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 KCTD2Q14681 263 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 FBXO46Q6PJ61 603 aaPredicted RBP16.65■□□□□ 0.26
CSTF3-202ENST00000431742 APBA2Q99767 749 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
CSTF3-202ENST00000431742 MAF1Q9H063 256 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
CSTF3-202ENST00000431742 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
CSTF3-202ENST00000431742 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
CSTF3-202ENST00000431742 FRMPD3Q5JV73 1810 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 hCG_1642624A0A1W2PR95 340 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 PRPF3O43395 683 aaKnown RBP16.64■□□□□ 0.25
CSTF3-202ENST00000431742 COBLO75128 1261 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 XRCC5P13010 732 aaKnown RBP16.64■□□□□ 0.25
CSTF3-202ENST00000431742 GHRHRQ02643 423 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 RGS22Q8NE09 1264 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
CSTF3-202ENST00000431742 MRPL11Q9Y3B7 192 aaKnown RBP16.64■□□□□ 0.25
CSTF3-202ENST00000431742 PFASO15067 1338 aa16.64■□□□□ 0.25
CSTF3-202ENST00000431742 CTDNEP1O95476 244 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 IGHA2P01877 340 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 ZNF792Q3KQV3 632 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 COL13A1Q5TAT6 717 aaPredicted RBP16.63■□□□□ 0.25
CSTF3-202ENST00000431742 ANKRD35Q8N283 1001 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 NECAB1Q8N987 351 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 FAM133AQ8N9E0 248 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 PHKBQ93100 1093 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 ZSCAN31Q96LW9 406 aaPredicted RBP16.63■□□□□ 0.25
CSTF3-202ENST00000431742 FGD4Q96M96 766 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 CYP39A1Q9NYL5 469 aa16.63■□□□□ 0.25
CSTF3-202ENST00000431742 V9GY48 417 aaPredicted RBP16.63■□□□□ 0.25
CSTF3-202ENST00000431742 KIAA1217Q5T5P2 1943 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 CPLX1O14810 134 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 PGK2P07205 417 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 CYP2B6P20813 491 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 PKN1Q16512 942 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-202ENST00000431742 WWC2Q6AWC2 1192 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 SLC30A10Q6XR72 485 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-202ENST00000431742 NPLOC4Q8TAT6 608 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 RAET1EQ8TD07 263 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 PXYLP1Q8TE99 480 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 SH2B1Q9NRF2 756 aaPredicted RBP16.62■□□□□ 0.25
CSTF3-202ENST00000431742 DIS3Q9Y2L1 958 aaKnown RBP16.62■□□□□ 0.25
CSTF3-202ENST00000431742 STK36Q9NRP7 1315 aa16.62■□□□□ 0.25
CSTF3-202ENST00000431742 CENPFP49454 3210 aa16.61■□□□□ 0.25
CSTF3-202ENST00000431742 ADCY3O60266 1144 aa16.61■□□□□ 0.25
CSTF3-202ENST00000431742 CDKL5O76039 1030 aa16.61■□□□□ 0.25
CSTF3-202ENST00000431742 SCG2P13521 617 aa16.61■□□□□ 0.25
CSTF3-202ENST00000431742 MCM2P49736 904 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms