RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PDHBP11177 359 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 CCZ1BP86790 482 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 CCZ1P86791 482 aaPredicted RBP14.51□□□□□ -0.09
DDX56-204ENST00000431640 NONOQ15233 471 aaKnown RBP eCLIP14.51□□□□□ -0.09
DDX56-204ENST00000431640 TYW1BQ6NUM6 668 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 GRAMD1CQ8IYS0 662 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 CCDC112Q8NEF3 446 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 AK8Q96MA6 479 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 TMEM39BQ9GZU3 492 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 GGA3Q9NZ52 723 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 NFE2L3Q9Y4A8 694 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 PAXBP1Q9Y5B6 917 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 GREB1LQ9C091 1923 aaPredicted RBP14.51□□□□□ -0.09
DDX56-204ENST00000431640 BAZ2BQ9UIF8 2168 aaKnown RBP14.51□□□□□ -0.09
DDX56-204ENST00000431640 PAPPA2Q9BXP8 1791 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 FAM196BA6NMK8 535 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 USP17L5A8MUK1 530 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 H7C1D1 291 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 TUBB4AP04350 444 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 ATP1A3P13637 1013 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 ZNF18P17022 549 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 IL17AQ16552 155 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 INF2Q27J81 1249 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 ANGEL2Q5VTE6 544 aaKnown RBP14.51□□□□□ -0.09
DDX56-204ENST00000431640 SPATA1Q5VX52 437 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 DLK2Q6UY11 383 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 CCSER1Q9C0I3 900 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 CUEDC2Q9H467 287 aa14.51□□□□□ -0.09
DDX56-204ENST00000431640 ADARB2Q9NS39 739 aaKnown RBP14.51□□□□□ -0.09
DDX56-204ENST00000431640 MYH8P13535 1937 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 KIF2AO00139 706 aaPredicted RBP14.5□□□□□ -0.09
DDX56-204ENST00000431640 CCP110O43303 1012 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 AKR1B1P15121 316 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 UBA7P41226 1012 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 MMP14P50281 582 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 SHROOM1Q2M3G4 852 aaPredicted RBP14.5□□□□□ -0.09
DDX56-204ENST00000431640 GPATCH4Q5T3I0 446 aaKnown RBP14.5□□□□□ -0.09
DDX56-204ENST00000431640 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 PPP1R18Q6NYC8 613 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 PDXDC2PQ6P474 469 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 TEPSINQ96N21 525 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 CTAGE1Q96RT6 745 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 PIGSQ96S52 555 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 MAGEF1Q9HAY2 307 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 VAT1LQ9HCJ6 419 aa14.5□□□□□ -0.09
DDX56-204ENST00000431640 POLR2AP24928 1970 aaKnown RBP14.5□□□□□ -0.09
DDX56-204ENST00000431640 ADAMTS3O15072 1205 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 ENTPD3O75355 529 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 TNNT1P13805 278 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 EPHX2P34913 555 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 GTF2F1P35269 517 aaKnown RBP eCLIP14.49□□□□□ -0.091e-7■■■■■ 30.9
DDX56-204ENST00000431640 STAT6P42226 847 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 ARID5BQ14865 1188 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 RRAGBQ5VZM2 374 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 NEK8Q86SG6 692 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 RASGRP4Q8TDF6 673 aa14.49□□□□□ -0.09
DDX56-204ENST00000431640 GTPBP4Q9BZE4 634 aaKnown RBP14.49□□□□□ -0.09
DDX56-204ENST00000431640 TAF1DQ9H5J8 278 aaPredicted RBP14.49□□□□□ -0.09
DDX56-204ENST00000431640 PNMA6FA0A0J9YX94 578 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 SHMT1P34896 483 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 FMR1Q06787 632 aaKnown RBP eCLIP14.48□□□□□ -0.09
DDX56-204ENST00000431640 FKBP1CQ5VVH2 108 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 ARMCX5Q6P1M9 558 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 REXO1Q8N1G1 1221 aaKnown RBP14.48□□□□□ -0.09
DDX56-204ENST00000431640 FAM151AQ8WW52 585 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 DISC1Q9NRI5 854 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 PI4KBQ9UBF8 816 aa14.48□□□□□ -0.09
DDX56-204ENST00000431640 PPP1R3GB7ZBB8 358 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 CCNT1O60563 726 aaKnown RBP14.47□□□□□ -0.09
DDX56-204ENST00000431640 OR52Z1P0C646 297 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 ZNF543Q08ER8 600 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 CUL4BQ13620 913 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 RASA3Q14644 834 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 RRP1BQ14684 758 aaKnown RBP14.47□□□□□ -0.09
DDX56-204ENST00000431640 PTPN14Q15678 1187 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 ZNF658Q5TYW1 1059 aaPredicted RBP14.47□□□□□ -0.09
DDX56-204ENST00000431640 PRAMEF18Q5VWM3 479 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 FAM83AQ86UY5 434 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 CCAR2Q8N163 923 aaKnown RBP14.47□□□□□ -0.09
DDX56-204ENST00000431640 UBA5Q9GZZ9 404 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 GLT8D2Q9H1C3 349 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 TMOD2Q9NZR1 351 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 ADCY7P51828 1080 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 NR1I3Q14994 352 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 MKL1Q969V6 931 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
DDX56-204ENST00000431640 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 KANSL2Q9H9L4 492 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 NMRK2Q9NPI5 230 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 RWDD2AQ9UIY3 292 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 OTOFQ9HC10 1997 aa14.47□□□□□ -0.09
DDX56-204ENST00000431640 ADM5C9JUS6 153 aa14.46□□□□□ -0.09
DDX56-204ENST00000431640 MPHOSPH10O00566 681 aaKnown RBP14.46□□□□□ -0.09
DDX56-204ENST00000431640 RPN1P04843 607 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms