RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 ADORA2AP29274 412 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 RGS2P41220 211 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 NTRK3Q16288 839 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 USH1GQ495M9 461 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 MUM1L1Q5H9M0 696 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 CLEC4DQ8WXI8 215 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 MAF1Q9H063 256 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 SLKQ9H2G2 1235 aaPredicted RBP21.34■■□□□ 1.01
RFTN1-202ENST00000431547 NCOA5Q9HCD5 579 aaKnown RBP21.34■■□□□ 1.01
RFTN1-202ENST00000431547 SEC63Q9UGP8 760 aaKnown RBP21.34■■□□□ 1.01
RFTN1-202ENST00000431547 LIMCH1Q9UPQ0 1083 aa21.34■■□□□ 1.01
RFTN1-202ENST00000431547 CNTNAP5Q8WYK1 1306 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 IFNAR1P17181 557 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 TAL1P17542 331 aaPredicted RBP21.33■■□□□ 1.01
RFTN1-202ENST00000431547 STK3Q13188 491 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 ANKRD35Q8N283 1001 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 RGS22Q8NE09 1264 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 RAET1EQ8TD07 263 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 PIBF1Q8WXW3 757 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 MRPL11Q9Y3B7 192 aaKnown RBP21.33■■□□□ 1.01
RFTN1-202ENST00000431547 PCDHA1Q9Y5I3 950 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 PTCH2Q9Y6C5 1203 aa21.33■■□□□ 1.01
RFTN1-202ENST00000431547 V9GY48 417 aaPredicted RBP21.33■■□□□ 1.01
RFTN1-202ENST00000431547 ST18O60284 1047 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 COBLO75128 1261 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 CYP2B6P20813 491 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 ME3Q16798 604 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 NOL8Q76FK4 1167 aaKnown RBP21.32■■□□□ 1
RFTN1-202ENST00000431547 DPP9Q86TI2 863 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 PXYLP1Q8TE99 480 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 DDX11Q96FC9 970 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 MCOLN1Q9GZU1 580 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 SLC5A4Q9NY91 659 aa21.32■■□□□ 1
RFTN1-202ENST00000431547 COL11A1P12107 1806 aaPredicted RBP21.32■■□□□ 1
RFTN1-202ENST00000431547 DNAJC25-GNG10A0A024R161 153 aa21.31■■□□□ 1
RFTN1-202ENST00000431547 NFIBO00712 420 aa21.31■■□□□ 1
RFTN1-202ENST00000431547 SCRN1Q12765 414 aa21.31■■□□□ 1
RFTN1-202ENST00000431547 CPLX2Q6PUV4 134 aaKnown RBP21.31■■□□□ 1
RFTN1-202ENST00000431547 APBA2Q99767 749 aa21.31■■□□□ 1
RFTN1-202ENST00000431547 A1CFQ9NQ94 594 aaKnown RBP21.31■■□□□ 1
RFTN1-202ENST00000431547 RBM27Q9P2N5 1060 aaKnown RBP21.31■■□□□ 1
RFTN1-202ENST00000431547 DIS3Q9Y2L1 958 aaKnown RBP21.31■■□□□ 1
RFTN1-202ENST00000431547 ZSWIM8A7E2V4 1837 aa21.31■■□□□ 1
RFTN1-202ENST00000431547 PFASO15067 1338 aa21.3■■□□□ 1
RFTN1-202ENST00000431547 hCG_1642624A0A1W2PR95 340 aa21.3■■□□□ 1
RFTN1-202ENST00000431547 CPLX1O14810 134 aa21.3■■□□□ 1
RFTN1-202ENST00000431547 PRPF3O43395 683 aaKnown RBP21.3■■□□□ 1
RFTN1-202ENST00000431547 ADCY3O60266 1144 aa21.3■■□□□ 1
RFTN1-202ENST00000431547 MCF2L2Q86YR7 1114 aa21.3■■□□□ 1
RFTN1-202ENST00000431547 TRMT44Q8IYL2 757 aaKnown RBP21.3■■□□□ 1
RFTN1-202ENST00000431547 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
RFTN1-202ENST00000431547 CYP39A1Q9NYL5 469 aa21.3■■□□□ 1
RFTN1-202ENST00000431547 LARGE1O95461 756 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 PGK2P07205 417 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 ZNF792Q3KQV3 632 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 NSMFQ6X4W1 530 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 SLAIN1Q8ND83 568 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 NPLOC4Q8TAT6 608 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 GTF3C6Q969F1 213 aa21.29■■□□□ 1
RFTN1-202ENST00000431547 RNF26Q9BY78 433 aaPredicted RBP21.29■■□□□ 1
RFTN1-202ENST00000431547 POTEB2H3BUK9 544 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 OPLAHO14841 1288 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 GRK4P32298 578 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 AKAP17AQ02040 695 aaKnown RBP21.28■■□□□ 1
RFTN1-202ENST00000431547 BAATQ14032 418 aaPredicted RBP21.28■■□□□ 1
RFTN1-202ENST00000431547 RNF207Q6ZRF8 634 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 SAMD3Q8N6K7 520 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 NECAB1Q8N987 351 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 FAM133AQ8N9E0 248 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 PHKBQ93100 1093 aa21.28■■□□□ 1
RFTN1-202ENST00000431547 MGAMO43451 1857 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 hCG_1984214I3L0E3 225 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 CDKL5O76039 1030 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 MCM2P49736 904 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 GHRHRQ02643 423 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 SSRP1Q08945 709 aaKnown RBP21.27■■□□□ 1
RFTN1-202ENST00000431547 PFKFB3Q16875 520 aaPredicted RBP21.27■■□□□ 1
RFTN1-202ENST00000431547 OLFML2BQ68BL8 750 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 HEATR3Q7Z4Q2 680 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 TRIM22Q8IYM9 498 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 ZNF713Q8N859 430 aaPredicted RBP21.27■■□□□ 1
RFTN1-202ENST00000431547 SLC26A6Q9BXS9 759 aa21.27■■□□□ 1
RFTN1-202ENST00000431547 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
RFTN1-202ENST00000431547 MAP3K20Q9NYL2 800 aaKnown RBP21.27■■□□□ 1
RFTN1-202ENST00000431547 PTPDC1A2A3K4 754 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 IGHA2P01877 340 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 SCG2P13521 617 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 ELNP15502 786 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 RPS6P62753 249 aaKnown RBP21.26■□□□□ 0.99
RFTN1-202ENST00000431547 PKN1Q16512 942 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 CCL14Q16627 93 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 SLC9C1Q4G0N8 1177 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 WWC2Q6AWC2 1192 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 ZNF467Q7Z7K2 595 aaPredicted RBP21.26■□□□□ 0.99
RFTN1-202ENST00000431547 TRIB2Q92519 343 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 TBC1D5Q92609 795 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 MAML3Q96JK9 1138 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 ZNF236Q9UL36 1845 aa21.26■□□□□ 0.99
RFTN1-202ENST00000431547 HSD17B4P51659 736 aa21.25■□□□□ 0.99
RFTN1-202ENST00000431547 CNTN2Q02246 1040 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms