RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 STRBPQ96SI9 672 aaKnown RBP9.9□□□□□ -0.82
CDH13-203ENST00000431540 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
CDH13-203ENST00000431540 LRRCC1Q9C099 1032 aa9.9□□□□□ -0.82
CDH13-203ENST00000431540 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.82
CDH13-203ENST00000431540 SLC38A10Q9HBR0 1119 aa9.9□□□□□ -0.82
CDH13-203ENST00000431540 STARD7Q9NQZ5 370 aa9.9□□□□□ -0.82
CDH13-203ENST00000431540 PNMA2Q9UL42 364 aa9.9□□□□□ -0.82
CDH13-203ENST00000431540 PRUNE2Q8WUY3 3088 aa9.9□□□□□ -0.83
CDH13-203ENST00000431540 ASB14A6NK59 587 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 TLR3O15455 904 aaKnown RBP9.89□□□□□ -0.83
CDH13-203ENST00000431540 SNAI1O95863 264 aaPredicted RBP9.89□□□□□ -0.83
CDH13-203ENST00000431540 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDH13-203ENST00000431540 ACVR2BQ13705 512 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 KCNA10Q16322 511 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 C9orf50Q5SZB4 431 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 RCSD1Q6JBY9 416 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 SH3RF1Q7Z6J0 888 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 SIRT2Q8IXJ6 389 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 SPICE1Q8N0Z3 855 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 KBTBD3Q8NAB2 608 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 GPATCH3Q96I76 525 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 RNPC3Q96LT9 517 aaKnown RBP9.89□□□□□ -0.83
CDH13-203ENST00000431540 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDH13-203ENST00000431540 MTIF3Q9H2K0 278 aaKnown RBP9.89□□□□□ -0.83
CDH13-203ENST00000431540 TTYH1Q9H313 450 aaPredicted RBP9.89□□□□□ -0.83
CDH13-203ENST00000431540 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 PRDM5Q9NQX1 630 aaPredicted RBP9.89□□□□□ -0.83
CDH13-203ENST00000431540 ECHDC1Q9NTX5 307 aa9.89□□□□□ -0.83
CDH13-203ENST00000431540 IGKV6D-41A0A0C4DH26 115 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 A0A0U1RQG5 324 aaPredicted RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 GSG1L2A8MUP6 293 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 ARVCFO00192 962 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 APBB1O00213 710 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 PRKAB2O43741 272 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 ZEB2O60315 1214 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 TTLL1O95922 423 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 PGK1P00558 417 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 SLC3A2P08195 630 aaKnown RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 RASA1P20936 1047 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 NT5C2P49902 561 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 PDE4BQ07343 736 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 FAM83BQ5T0W9 1011 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 IQSEC1Q6DN90 963 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 SNRNP48Q6IEG0 339 aaKnown RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 PSRC1Q6PGN9 363 aaPredicted RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 FAM160B2Q86V87 743 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 SLC43A3Q8NBI5 491 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 PANK1Q8TE04 598 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 ATXN2LQ8WWM7 1075 aaKnown RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 APPBP2Q92624 585 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 FERMT2Q96AC1 680 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 NACAP1Q9BZK3 213 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 PUS7LQ9H0K6 701 aaKnown RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 MTMR4Q9NYA4 1195 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 TBX21Q9UL17 535 aa9.88□□□□□ -0.83
CDH13-203ENST00000431540 CTDP1Q9Y5B0 961 aaPredicted RBP9.88□□□□□ -0.83
CDH13-203ENST00000431540 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 RNF113AO15541 343 aaKnown RBP9.87□□□□□ -0.83
CDH13-203ENST00000431540 PGK2P07205 417 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 CYP2D6P10635 497 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 FOSL2P15408 326 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 RAB30Q15771 203 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 TJAP1Q5JTD0 557 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 RPUSD2Q8IZ73 545 aaKnown RBP9.87□□□□□ -0.83
CDH13-203ENST00000431540 ANKRD35Q8N283 1001 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 GMCL1Q96IK5 515 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
CDH13-203ENST00000431540 ZNF576Q9H609 170 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 DCTPP1Q9H773 170 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 PRDM6Q9NQX0 595 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 FBXO28Q9NVF7 368 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 PLIN4Q96Q06 1357 aa9.87□□□□□ -0.83
CDH13-203ENST00000431540 TTC41PQ6P2S7 1318 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 PQBP1O60828 265 aaKnown RBP9.86□□□□□ -0.83
CDH13-203ENST00000431540 NDUFB10O96000 172 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 CD4P01730 458 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 ASGR1P07306 291 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 PFKMP08237 780 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 DNAJB2P25686 324 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 ITGB8P26012 769 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 PROX2Q3B8N5 592 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 CCDC144BQ3MJ40 725 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 ANO1Q5XXA6 986 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 FAM133AQ8N9E0 248 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 HERVK_113Q902F9 699 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 GBF1Q92538 1859 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.86□□□□□ -0.83
CDH13-203ENST00000431540 CLIP2Q9UDT6 1046 aa9.86□□□□□ -0.83
CDH13-203ENST00000431540 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
CDH13-203ENST00000431540 ERC2O15083 957 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 C6orf222P0C671 652 aaPredicted RBP9.85□□□□□ -0.83
CDH13-203ENST00000431540 SUPT20HL2P0C7V6 817 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 BMP3P12645 472 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 TAL1P17542 331 aaPredicted RBP9.85□□□□□ -0.83
CDH13-203ENST00000431540 POU3F3P20264 500 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms